Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: reductive pentose-phosphate cycle

Term: GO:0019253  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene67675 SustainPine v3.0 384
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 7.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Larix laricina (Tamarack) (Pinus laricina). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 3.81e-24
C-terminus
sp_v3.0_unigene67961 SustainPine v3.0 255
• AutoFact: Ribulose-phosphate 3-epimerase n=1 Tax=Ricinus communis RepID=B9RLW1_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentose-5-phosphate 3-epimerase 2.497e-16
C-terminus
sp_v3.0_unigene68243 SustainPine v3.0 363
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 2.94273e-44
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene68361 SustainPine v3.0 281
• AutoFact: Ribulose bisphosphate carboxylase small chain n=3 Tax=Triticeae RepID=Q9FRZ3_WHEAT 8.0e-40
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene70808 SustainPine v3.0 380
• AutoFact: Phosphoglycerate kinase, chloroplastic n=13 Tax=Triticeae RepID=PGKH_WHEAT 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
C-terminus
sp_v3.0_unigene72096 SustainPine v3.0 233
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 7.0e-28
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene73541 SustainPine v3.0 281
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-07
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 3.966e-07
Putative N-terminus
sp_v3.0_unigene73549 SustainPine v3.0 406
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.4013e-45
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
N-terminus
sp_v3.0_unigene73694 SustainPine v3.0 446
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 2.231e-24
C-terminus
sp_v3.0_unigene74811 SustainPine v3.0 240
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene75567 SustainPine v3.0 181
• AutoFact: Ribulose-phosphate 3-epimerase, chloroplastic n=7 Tax=Poaceae RepID=RPE_ORYSJ 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose-phosphate 3-epimerase 9.315e-12
Internal
sp_v3.0_unigene75606 SustainPine v3.0 213
• AutoFact: Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=3 Tax=Spermatophyta RepID=Q5TME3_PINTH 4.0e-19
• FL-Next: tr=Glyceraldehyde-phosphate dehydrogenase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase 4.154e-20
Internal
sp_v3.0_unigene75661 SustainPine v3.0 377
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene76160 SustainPine v3.0 304
• AutoFact: glyceraldehyde-3-phosphate dehydrogenase subunit A2 [Physcomitrella patens] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase 5.47e-16
Putative C-terminus
sp_v3.0_unigene76193 SustainPine v3.0 345
• AutoFact: Phosphoribulokinase, chloroplastic n=3 Tax=Chlamydomonadales RepID=KPPR_CHLRE 1.0e-10
• FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoribulokinase 6.955e-23
C-terminus
sp_v3.0_unigene76517 SustainPine v3.0 319
• AutoFact: Glyceraldehyde-3-phosphate dehydrogenase n=5 Tax=Pinaceae RepID=Q37264_PINSY 3.0e-16
• FL-Next: tr=Glyceraldehyde-3-phosphate dehydrogenase; Pinus sylvestris (Scots pine). Plastid; Chloroplast. 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase 0.0
C-terminus
sp_v3.0_unigene77150 SustainPine v3.0 174
• AutoFact: Phosphoribulokinase (Fragment) n=1 Tax=Picea abies RepID=Q3ZDJ0_PICAB 1.0e-14
• FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoribulokinase 1.089e-39
Putative C-terminus
sp_v3.0_unigene77443 SustainPine v3.0 428
• AutoFact: RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic; Short=FBPase; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase; Flags: Precursor gb|AAD10207.1| fructose 1,6-bisphosphatase [Spinacia oleracea] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-1,6-bisphosphatase, chloroplastic 3.646e-27
Internal
sp_v3.0_unigene77509 SustainPine v3.0 257
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 5.0e-27
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 7.633e-31
Putative C-terminus
sp_v3.0_unigene77942 SustainPine v3.0 203
• AutoFact: Phosphoribulokinase, chloroplastic n=1 Tax=Spinacia oleracea RepID=KPPR_SPIOL 3.0e-25
• FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoribulokinase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain