Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene149139 SustainPine v3.0 141
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 1.0e-10
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 1.847e-09
Putative C-terminus
sp_v3.0_unigene149169 SustainPine v3.0 164
• AutoFact: Glycoside hydrolase, family 28 n=1 Tax=Medicago truncatula RepID=Q2HVV9_MEDTR 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 2.2e-29
Internal
sp_v3.0_unigene149272 SustainPine v3.0 209
• AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene149387 SustainPine v3.0 167
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene149687 SustainPine v3.0 269
• AutoFact: pectate lyase [Prunus persica] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 7.942e-39
Internal
sp_v3.0_unigene150004 SustainPine v3.0 210
• AutoFact: Pectinesterase n=2 Tax=Selaginella moellendorffii RepID=D8T5K6_SELML 4.0e-17
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 6.97e-06
Internal
sp_v3.0_unigene150070 SustainPine v3.0 121
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 5.0e-16
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 2.459e-40
Internal
sp_v3.0_unigene150231 SustainPine v3.0 390
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 6.676e-32
C-terminus
sp_v3.0_unigene150720 SustainPine v3.0 242
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 9.47e-32
Putative C-terminus
sp_v3.0_unigene151145 SustainPine v3.0 273
• AutoFact: 40S ribosomal protein S11 [Plasmodium vivax SaI-1] ref|XP_002258883.1| 40s ribosomal protein s11 [Plasmodium knowlesi strain H] gb|EDL44809.1| 40S ribosomal protein S11, putative [Plasmodium vivax] emb|CAQ39656.1| 40s ribosomal protein s11, putative [Plas 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.003e-31
C-terminus
sp_v3.0_unigene152714 SustainPine v3.0 214
• AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9GSC5_POPTR 4.0e-20
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene153406 SustainPine v3.0 226
• AutoFact: Protein component of the small (40S) ribosomal subunit n=1 Tax=Pichia angusta DL-1 RepID=E7R2M9_PICAD 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.009e-35
Putative C-terminus
sp_v3.0_unigene153817 SustainPine v3.0 116
• AutoFact: 40S ribosomal protein S11, putative n=6 Tax=Plasmodium RepID=A5K7Q0_PLAVS 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.999e-32
Internal
sp_v3.0_unigene154132 SustainPine v3.0 497
• AutoFact: Glycosyl hydrolase family 28 n=1 Tax=Glomerella graminicola M1.001 RepID=E3QWZ6_COLGM 0.0
• FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Internal
sp_v3.0_unigene154149 SustainPine v3.0 376
• AutoFact: RS11, ribosomal protein 11 40S small ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B8C1P3_THAPS 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.286e-35
C-terminus
sp_v3.0_unigene154810 SustainPine v3.0 384
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.14e-35
C-terminus
sp_v3.0_unigene154840 SustainPine v3.0 377
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RPV5_RICCO 2.0e-11
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155102 SustainPine v3.0 275
• AutoFact: Glyco_hydro_28 domain containing protein 1.0e-05
• FL-Next: tr=Predicted protein; Phaeodactylum tricornutum (strain CCAP 1055/1). 0.0
Internal
sp_v3.0_unigene155238 SustainPine v3.0 425
• AutoFact: PREDICTED: similar to ribosomal protein S11-2 isoform 1 [Tribolium castaneum] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.14e-35
C-terminus
sp_v3.0_unigene155874 SustainPine v3.0 126
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RFE3_RICCO 5.0e-13
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain