Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129712 SustainPine v3.0 312
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RDW4_RICCO 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene129815 SustainPine v3.0 934
AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene129854 SustainPine v3.0 396
AutoFact: pfam01535, PPR, PPR repeat 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.602e-20
Internal
sp_v3.0_unigene130044 SustainPine v3.0 470
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene130070 SustainPine v3.0 406
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene130398 SustainPine v3.0 659
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein At1g71420 9.747e-06
N-terminus
sp_v3.0_unigene130451 SustainPine v3.0 478
AutoFact: Pectinesterase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TEQ0_PHYPA 3.0e-39
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 2.574e-39
Internal
sp_v3.0_unigene130695 SustainPine v3.0 855
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene130722 SustainPine v3.0 635
AutoFact: pectate lyase precursor [Glycine max] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene131116 SustainPine v3.0 609
AutoFact: Unassigned protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131117 SustainPine v3.0 496
AutoFact: Pectinesterase n=2 Tax=Vitis vinifera RepID=A5B5Z3_VITVI 1.0e-34
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 4.19e-34
C-terminus
sp_v3.0_unigene131180 SustainPine v3.0 347
AutoFact: Polygalacturonase 5 n=1 Tax=Solanum lycopersicum RepID=O22313_SOLLC 6.0e-23
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Sma3: Putative polygalacturonase 3.599e-11
Internal
sp_v3.0_unigene131182 SustainPine v3.0 349
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene131270 SustainPine v3.0 301
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.827e-08
Internal
sp_v3.0_unigene131385 SustainPine v3.0 554
AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene131397 SustainPine v3.0 562
AutoFact: Polygalacturonase (Fragment) n=2 Tax=Musa acuminata RepID=A9UFC8_MUSAC 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene134425 SustainPine v3.0 234
AutoFact: Unassigned protein
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene135629 SustainPine v3.0 420
AutoFact: Protein kinase [Medicago truncatula] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase-like protein 3.584e-22
Internal
sp_v3.0_unigene136086 SustainPine v3.0 336
AutoFact: Pectinesterase (Fragment) n=1 Tax=Vitis hybrid cultivar RepID=A9CSJ7_9ROSI 3.0e-38
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene136328 SustainPine v3.0 205
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 3.375e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain