Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene111858 SustainPine v3.0 442
• AutoFact: Pectinesterase n=2 Tax=Vitis vinifera RepID=A5B5Z3_VITVI 3.0e-10
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 3.328e-13
Internal
sp_v3.0_unigene111889 SustainPine v3.0 427
• AutoFact: putative pectate-lyase [Capsicum annuum] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 1.059e-28
N-terminus
sp_v3.0_unigene112002 SustainPine v3.0 375
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene112773 SustainPine v3.0 674
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SL84_RICCO 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.218e-07
Putative Complete
sp_v3.0_unigene113317 SustainPine v3.0 427
• AutoFact: pfam04043, PMEI, Plant invertase/pectin methylesterase inhibitor 2.0e-08
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene113352 SustainPine v3.0 366
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SL84_RICCO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.165e-08
Internal
sp_v3.0_unigene113819 SustainPine v3.0 661
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene114423 SustainPine v3.0 132
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 1.0e-17
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 4.818e-17
Internal
sp_v3.0_unigene115418 SustainPine v3.0 243
• AutoFact: Polygalacturonase n=8 Tax=Prunus RepID=PGLR_PRUPE 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ripening-induced polygalacturonase 5.361e-06
Internal
sp_v3.0_unigene116482 SustainPine v3.0 570
• AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] gb|EAZ37493.1| hypothetical protein OsJ_21827 [Oryza sativa Japonica Group] 2.0e-25
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 8.929e-22
Internal
sp_v3.0_unigene116904 SustainPine v3.0 521
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-17
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene117700 SustainPine v3.0 450
• AutoFact: Polygalacturonase n=2 Tax=Arabidopsis thaliana RepID=F4I672_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene118896 SustainPine v3.0 110
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Medicago truncatula RepID=Q6PQ96_MEDTR 8.0e-06
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene120366 SustainPine v3.0 368
• AutoFact: Putative leucine rich repeat transmembrane protein kinase n=1 Tax=Corchorus olitorius RepID=B6E503_9ROSI 8.0e-14
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 4.146e-09
Internal
sp_v3.0_unigene120505 SustainPine v3.0 241
• AutoFact: pfam00069, Pkinase, Protein kinase domain 1.0e-09
• FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At3g47570; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Leucine Rich Repeat, putative 3.032e-21
Internal
sp_v3.0_unigene120839 SustainPine v3.0 301
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RBA6_RICCO 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.828e-07
Internal
sp_v3.0_unigene121171 SustainPine v3.0 363
• AutoFact: pectinesterase 11 [Arabidopsis thaliana] sp|Q9SIJ9.1|PME11_ARATH RecName: Full=Putative pectinesterase 11; Short=PE 11; AltName: Full=Pectin methylesterase 11; Short=AtPME11 gb|AAD23644.1| putative pectinesterase [Arabidopsis thaliana] gb|AEC07202.1| pect 1.0e-32
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene123106 SustainPine v3.0 319
• AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9N5H3_POPTR 6.0e-20
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene125335 SustainPine v3.0 635
• AutoFact: Polygalacturonase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCM0_CUCME 0.0
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125354 SustainPine v3.0 496
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS70_RICCO 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain