Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene102829 SustainPine v3.0 564
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene103285 SustainPine v3.0 1190
• AutoFact: putative pectate lyase [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Cup s 1 pollen allergen; Cupressus sempervirens. 0.0
• Sma3: Pectate lyase, putative 1.629e-10
N-terminus
sp_v3.0_unigene103299 SustainPine v3.0 256
• AutoFact: Ripening-related pectate lyase n=1 Tax=Mangifera indica RepID=Q52PJ2_MANIN 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 2.071e-23
Putative C-terminus
sp_v3.0_unigene104021 SustainPine v3.0 453
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.243e-34
Internal
sp_v3.0_unigene104323 SustainPine v3.0 398
• AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 2.935e-24
Internal
sp_v3.0_unigene104626 SustainPine v3.0 418
• AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RZX1_RICCO 8.0e-25
• FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Putative N-terminus
sp_v3.0_unigene105020 SustainPine v3.0 374
• AutoFact: Pectinesterase n=2 Tax=Oryza sativa RepID=B8BBW3_ORYSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 1.4013e-44
Internal
sp_v3.0_unigene105301 SustainPine v3.0 290
• AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105450 SustainPine v3.0 686
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.761e-22
Internal
sp_v3.0_unigene105984 SustainPine v3.0 371
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.05e-07
Internal
sp_v3.0_unigene106619 SustainPine v3.0 430
• AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] dbj|BAD33650.1| putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] gb|EAZ44777.1| hypothetical protein OsJ_29408 [Oryza sativa Japonica Gr 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 2.103e-26
Internal
sp_v3.0_unigene106630 SustainPine v3.0 401
• AutoFact: pfam01535, PPR, PPR repeat 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107190 SustainPine v3.0 561
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 2.951e-35
N-terminus
sp_v3.0_unigene109275 SustainPine v3.0 374
• AutoFact: Unassigned protein 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene109420 SustainPine v3.0 510
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-35
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene109751 SustainPine v3.0 647
• AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9IHB0_POPTR 2.0e-34
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 8.401e-11
Putative C-terminus
sp_v3.0_unigene111138 SustainPine v3.0 442
• AutoFact: Polygalacturonase n=2 Tax=Cucumis RepID=E5GBI5_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 1.99e-26
Internal
sp_v3.0_unigene111315 SustainPine v3.0 322
• AutoFact: Pectinesterase-3, putative n=1 Tax=Ricinus communis RepID=B9RH55_RICCO 2.0e-37
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene111361 SustainPine v3.0 458
• AutoFact: Pentatricopeptide repeat protein 43 n=1 Tax=Funaria hygrometrica RepID=F5CAD7_FUNHY 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.013e-20
Internal
sp_v3.0_unigene111549 SustainPine v3.0 534
• AutoFact: receptor kinase 1 [Triticum aestivum] 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat family protein 2.996e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain