Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene209310 SustainPine v3.0 600
AutoFact: L35 n=1 Tax=Suberites domuncula RepID=Q4KTF0_SUBDO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.67e-18
Complete
sp_v3.0_unigene209318 SustainPine v3.0 479
AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.674e-16
Complete
sp_v3.0_unigene209325 SustainPine v3.0 579
AutoFact: Ribosomal protein L12e n=1 Tax=Timarcha balearica RepID=Q4GXJ1_TIMBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene209328 SustainPine v3.0 460
AutoFact: PREDICTED: ribosomal protein L27-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9F57 0.0
FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene209353 SustainPine v3.0 294
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene209519 SustainPine v3.0 626
AutoFact: 60S ribosomal protein L25 n=2 Tax=Metarhizium RepID=E9DWA0_METAQ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.412e-10
Putative Complete
sp_v3.0_unigene209578 SustainPine v3.0 473
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene209836 SustainPine v3.0 385
AutoFact: 60S ribosomal protein L34-1 n=28 Tax=Magnoliophyta RepID=RL341_ARATH 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L34 2.611e-12
Putative N-terminus
sp_v3.0_unigene210105 SustainPine v3.0 196
AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 6.404e-15
Internal
sp_v3.0_unigene210312 SustainPine v3.0 583
AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 3.007e-14
C-terminus
sp_v3.0_unigene210344 SustainPine v3.0 559
AutoFact: Ribosomal_L41 domain containing protein 4.0e-10
unknown
sp_v3.0_unigene210364 SustainPine v3.0 624
AutoFact: 60S ribosomal protein L28, putative n=1 Tax=Ricinus communis RepID=B9RQ66_RICCO 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L28 2.005e-12
Complete
sp_v3.0_unigene210365 SustainPine v3.0 761
AutoFact: 60S ribosomal protein L31 n=5 Tax=Pinaceae RepID=RL31_PICMA 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L31 2.229e-40
Complete
sp_v3.0_unigene210497 SustainPine v3.0 161
AutoFact: putative ribosomal protein L31 [Lactuca sativa] 1.0e-16
FL-Next: sp=60S ribosomal protein L31; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: 60S ribosomal protein L31 3.06699e-40
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain