Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene206330 SustainPine v3.0 324
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 1.0e-26
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene206675 SustainPine v3.0 284
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 4.788e-21
N-terminus
sp_v3.0_unigene206686 SustainPine v3.0 423
AutoFact: Ribosomal protein L21 n=8 Tax=Endopterygota RepID=D1LYQ2_MANSE 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 2.365e-10
C-terminus
sp_v3.0_unigene206882 SustainPine v3.0 484
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206927 SustainPine v3.0 450
AutoFact: PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] ref|XP_001179587.1| PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 5.046e-22
C-terminus
sp_v3.0_unigene206930 SustainPine v3.0 386
AutoFact: PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] ref|XP_001179587.1| PREDICTED: similar to ribosomal protein L9 [Strongylocentrotus purpuratus] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 5.046e-22
C-terminus
sp_v3.0_unigene207287 SustainPine v3.0 656
AutoFact: 60S ribosomal protein L12 n=3 Tax=Hypocreales RepID=E9EUF4_METAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene207352 SustainPine v3.0 288
AutoFact: 60S ribosomal protein L30-like protein n=6 Tax=Oryza sativa RepID=Q5QMX1_ORYSJ 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene207785 SustainPine v3.0 555
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 3.997e-19
Complete
sp_v3.0_unigene207801 SustainPine v3.0 519
AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 2.684e-20
Complete
sp_v3.0_unigene207862 SustainPine v3.0 439
AutoFact: Ribosomal protein L37 n=1 Tax=Picea sitchensis RepID=A9NJS5_PICSI 3.0e-25
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene208452 SustainPine v3.0 216
AutoFact: 60S ribosomal protein L31 n=5 Tax=Pinaceae RepID=RL31_PICMA 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L31 1.84999e-40
N-terminus
sp_v3.0_unigene208898 SustainPine v3.0 188
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 2.086e-11
N-terminus
sp_v3.0_unigene209051 SustainPine v3.0 507
AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 4.00001e-40
FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L19 2.8e-18
C-terminus
sp_v3.0_unigene209077 SustainPine v3.0 444
AutoFact: [J] COG2163 Ribosomal protein L14E/L6E/L27E 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60 ribosomal protein L14 3.872e-16
N-terminus
sp_v3.0_unigene209209 SustainPine v3.0 520
AutoFact: Ribosomal protein L30 n=3 Tax=Medicago truncatula RepID=Q2HVI3_MEDTR 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-2 1.272e-07
N-terminus
sp_v3.0_unigene209287 SustainPine v3.0 373
AutoFact: 60S ribosomal protein L44 n=1 Tax=Batrachochytrium dendrobatidis JAM81 RepID=F4P3P6_BATDE 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L44 2.207e-13
Complete
sp_v3.0_unigene209296 SustainPine v3.0 280
AutoFact: Ribosomal protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CFH4_9EUKA 2.0e-22
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.451e-32
C-terminus
sp_v3.0_unigene209305 SustainPine v3.0 386
AutoFact: Ribosomal protein L27a [Bos taurus] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.997e-12
N-terminus
sp_v3.0_unigene209307 SustainPine v3.0 435
AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.311e-11
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain