Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene57656 SustainPine v3.0 416
• AutoFact: 60S ribosomal protein L35-4 n=1 Tax=Arabidopsis thaliana RepID=F4KDR2_ARATH 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.001e-14
Putative N-terminus
sp_v3.0_unigene57715 SustainPine v3.0 299
• AutoFact: 60S ribosomal protein L37a, putative n=2 Tax=fabids RepID=B9RUR2_RICCO 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L37a 1.517e-14
Putative N-terminus
sp_v3.0_unigene58554 SustainPine v3.0 250
• AutoFact: 60S ribosomal protein L39-1 [Arabidopsis thaliana] sp|P51424.2|RL391_ARATH RecName: Full=60S ribosomal protein L39-1 gb|AAK49624.1|AF372908_1 F13D4.162/F13D4.162 [Arabidopsis thaliana] gb|AAL15360.1| AT4g31981/F13D4.162 [Arabidopsis thaliana] dbj|BAC42854 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L39 1.024e-13
Putative Complete
sp_v3.0_unigene60106 SustainPine v3.0 109
• AutoFact: 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gb|AAV92187.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gb|AAV92188.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gb|AAV92189.1| 60S ribosoma 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L31 5.986e-29
Putative N-terminus
sp_v3.0_unigene60358 SustainPine v3.0 402
• AutoFact: 60S ribosomal protein L13 (Fragment) n=4 Tax=Populus trichocarpa RepID=B9IIX6_POPTR 2.0e-38
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene61403 SustainPine v3.0 333
• AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 2.0e-15
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
C-terminus
sp_v3.0_unigene62969 SustainPine v3.0 314
• AutoFact: ribosomal protein L2 [Glycine max] 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 6.944e-28
Internal
sp_v3.0_unigene63029 SustainPine v3.0 188
• AutoFact: ribosomal protein L3-A2-II [Triticum aestivum] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.451e-17
Internal
sp_v3.0_unigene63219 SustainPine v3.0 247
• AutoFact: PREDICTED: similar to ribosomal protein L4 n=1 Tax=Nasonia vitripennis RepID=UPI00015B409C 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 3.703e-12
Internal
sp_v3.0_unigene64679 SustainPine v3.0 235
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 6.541e-18
Internal
sp_v3.0_unigene64984 SustainPine v3.0 134
• AutoFact: 60S ribosomal protein L36 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RXF5_PHYPA 2.0e-11
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
Putative C-terminus
sp_v3.0_unigene65535 SustainPine v3.0 119
• AutoFact: Ribosomal protein L19 n=4 Tax=core eudicotyledons RepID=A9PB34_POPTR 2.0e-08
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65536 SustainPine v3.0 155
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L2 2.549e-08
Internal
sp_v3.0_unigene65558 SustainPine v3.0 301
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L2 1.467e-07
Internal
sp_v3.0_unigene65676 SustainPine v3.0 209
• AutoFact: [J] COG0256 Ribosomal protein L18 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.903e-14
Internal
sp_v3.0_unigene65747 SustainPine v3.0 178
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65771 SustainPine v3.0 258
• AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L38 5.435e-19
C-terminus
sp_v3.0_unigene66630 SustainPine v3.0 381
• AutoFact: [J] COG0197 Ribosomal protein L16/L10E 9.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 7.048e-14
Internal
sp_v3.0_unigene66818 SustainPine v3.0 375
• AutoFact: [J] COG2163 Ribosomal protein L14E/L6E/L27E 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 ribosomal protein L14 5.199e-12
C-terminus
sp_v3.0_unigene67683 SustainPine v3.0 204
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 2.071e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain