Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene34901 SustainPine v3.0 436
• AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.42e-08
C-terminus
sp_v3.0_unigene35430 SustainPine v3.0 563
• AutoFact: 60S ribosomal protein L31 n=5 Tax=Pinaceae RepID=RL31_PICMA 1.0e-38
• FL-Next: sp=60S ribosomal protein L31; Picea mariana (Black spruce) (Abies mariana). 0.0
• Sma3: 60S ribosomal protein L31 1.20201e-40
C-terminus
sp_v3.0_unigene35436 SustainPine v3.0 578
• AutoFact: 60S ribosomal protein L31 n=5 Tax=Pinaceae RepID=RL31_PICMA 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L31 2.229e-40
Complete
sp_v3.0_unigene35747 SustainPine v3.0 312
• AutoFact: Putative 60S ribosomal protein RPL12 n=1 Tax=Phoronis muelleri RepID=B2YI34_9BILA 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.541e-15
Internal
sp_v3.0_unigene35750 SustainPine v3.0 487
• AutoFact: Ribosomal protein L35a n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U6J5_9EUKA 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L35A 2.209e-08
Putative Complete
sp_v3.0_unigene35793 SustainPine v3.0 420
• AutoFact: ribosomal protein [Pteris vittata] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene35815 SustainPine v3.0 541
• AutoFact: 60S ribosomal protein L3 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NY29_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.138e-21
Internal
sp_v3.0_unigene35816 SustainPine v3.0 468
• AutoFact: Ribosomal protein L37 n=2 Tax=Sclerotiniaceae RepID=A7F605_SCLS1 3.0e-36
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene35833 SustainPine v3.0 644
• AutoFact: Ribosomal protein rpl17 (Fragment) n=1 Tax=Eurythoe complanata RepID=A8UG49_EURCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.536e-10
C-terminus
sp_v3.0_unigene35837 SustainPine v3.0 648
• AutoFact: 60S ribosomal protein L8 (Fragment) n=1 Tax=Simulium nigrimanum RepID=D1FQB7_9DIPT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 7.652e-09
C-terminus
sp_v3.0_unigene35839 SustainPine v3.0 620
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 9.99967e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene35857 SustainPine v3.0 490
• AutoFact: ribosomal protein L34a, isoform A [Drosophila melanogaster] ref|NP_733136.1| ribosomal protein L34a, isoform B [Drosophila melanogaster] ref|NP_001189295.1| ribosomal protein L34a, isoform C [Drosophila melanogaster] gb|AAF56564.2| ribosomal protein L34a, 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L34 3.175e-12
Complete
sp_v3.0_unigene35870 SustainPine v3.0 518
• AutoFact: ribosomal protein L32 [Xenopus laevis] gb|AAH78535.1| MGC85374 protein [Xenopus laevis] gb|AAH80413.1| MGC85374 protein [Xenopus laevis] 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Complete
sp_v3.0_unigene35876 SustainPine v3.0 604
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D8LL36_ECTSI 0.0
• FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18a 3.829e-13
Complete
sp_v3.0_unigene35894 SustainPine v3.0 683
• AutoFact: 60S ribosomal protein L7a-2 [Arabidopsis thaliana] sp|Q9LZH9.1|RL7A2_ARATH RecName: Full=60S ribosomal protein L7a-2 emb|CAB83137.1| 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] gb|AAK97734.1| AT3g62870/F26K9_300 [Arabidopsis thaliana] gb|AAL3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.144e-08
C-terminus
sp_v3.0_unigene35897 SustainPine v3.0 593
• AutoFact: Ribosomal protein L19 n=1 Tax=Triticum aestivum RepID=Q7XY20_WHEAT 0.0
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
Putative Complete
sp_v3.0_unigene35899 SustainPine v3.0 525
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 4.0e-37
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene35903 SustainPine v3.0 465
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa RepID=RL13A_CYAPA 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 2.632e-20
C-terminus
sp_v3.0_unigene35906 SustainPine v3.0 631
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene35913 SustainPine v3.0 688
• AutoFact: 60S ribosomal protein L23a n=8 Tax=Zea mays RepID=B6UHJ9_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.449e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain