Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene167109 SustainPine v3.0 132
AutoFact: Actin-related protein 7 n=2 Tax=Arabidopsis RepID=ARP7_ARATH 2.0e-09
FL-Next: sp=Actin-related protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Actin related protein 1.936e-08
Internal
sp_v3.0_unigene167331 SustainPine v3.0 339
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RDE1_RICCO 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 4.464e-31
Internal
sp_v3.0_unigene167550 SustainPine v3.0 341
AutoFact: DUF260 domain containing protein 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 3.09967e-42
N-terminus
sp_v3.0_unigene167728 SustainPine v3.0 194
AutoFact: histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] sp|Q9M364.2|ATX3_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX3; AltName: Full=Protein SET DOMAIN GROUP 14; AltName: Full=Trithorax-homolog protein 3; Short=TRX-homolog protein 3 6.0e-12
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trithorax, putative 1.443e-08
Internal
sp_v3.0_unigene168310 SustainPine v3.0 229
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 5.0e-29
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWIRM domain protein 2.407e-12
Internal
sp_v3.0_unigene172387 SustainPine v3.0 208
AutoFact: Trypan_PARP multi-domain protein 3.0e-15
Sma3: Glycine-rich cell wall structural protein 1, putative 2.096e-08
coding
sp_v3.0_unigene173381 SustainPine v3.0 520
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Putative glycine rich protein 3.78e-18
coding
sp_v3.0_unigene176476 SustainPine v3.0 406
AutoFact: Trypan_PARP multi-domain protein 1.0e-13
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.736e-11
coding
sp_v3.0_unigene176970 SustainPine v3.0 384
AutoFact: Gly_rich multi-domain protein 7.0e-13
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 5.387e-17
coding
sp_v3.0_unigene182987 SustainPine v3.0 367
AutoFact: SET domain protein 123 n=1 Tax=Zea mays RepID=Q8GUQ7_MAIZE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene183282 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana GN=ASHR2 0.0
Internal
sp_v3.0_unigene188781 SustainPine v3.0 904
AutoFact: Trypan_PARP multi-domain protein 5.0e-17
Sma3: Glycine-rich protein 4.645e-14
coding
sp_v3.0_unigene189875 SustainPine v3.0 630
AutoFact: SET domain protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9IDM7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine N-methyltransferase ATXR6, putative 5.967e-09
C-terminus
sp_v3.0_unigene190482 SustainPine v3.0 369
AutoFact: Gly_rich multi-domain protein 1.0e-10
coding
sp_v3.0_unigene192667 SustainPine v3.0 439
AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene196430 SustainPine v3.0 401
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.00386e-43
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: p300/CBP acetyltransferase-related protein 8.619e-09
C-terminus
sp_v3.0_unigene196441 SustainPine v3.0 403
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 4 1.39e-08
Putative N-terminus
sp_v3.0_unigene200362 SustainPine v3.0 391
AutoFact: histone chaperone ASF1, putative [Aspergillus clavatus NRRL 1] gb|EAW09680.1| histone chaperone ASF1, putative [Aspergillus clavatus NRRL 1] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone chaperone 6.045e-16
N-terminus
sp_v3.0_unigene201110 SustainPine v3.0 381
AutoFact: Unassigned protein
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene202494 SustainPine v3.0 608
AutoFact: rootless concerning crown and seminal roots1 [Zea mays] gb|ABO21027.1| rootless concerning crown and seminal lateral roots [Zea mays] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 3.112e-35
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain