Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene139454 SustainPine v3.0 440
AutoFact: zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] gb|AEC07483.1| zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] 3.0e-37
FL-Next: sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene142891 SustainPine v3.0 301
AutoFact: Putative MYST-like histone acetyltransferase 1 n=12 Tax=Poaceae RepID=MYST1_ORYSJ 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 3.995e-15
C-terminus
sp_v3.0_unigene150255 SustainPine v3.0 549
AutoFact: Histone acetyltransferase ESA1 n=1 Tax=Gibberella zeae PH-1 RepID=ESA1_GIBZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 1.461e-15
C-terminus
sp_v3.0_unigene152377 SustainPine v3.0 525
AutoFact: PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Nasonia vitripennis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene152733 SustainPine v3.0 475
AutoFact: Actin (Fragment) n=1 Tax=Enchytraeus japonensis RepID=B6RNM7_9ANNE 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.032e-32
C-terminus
sp_v3.0_unigene153742 SustainPine v3.0 383
AutoFact: Arginine N-methyltransferase 5 (Fragment) n=3 Tax=Euteleostei RepID=C0PUL6_SALSA 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Shk1 kinase-binding protein 1 homolog 4.503e-09
Putative C-terminus
sp_v3.0_unigene157278 SustainPine v3.0 210
AutoFact: Histone deacetylase n=1 Tax=Aedes aegypti RepID=Q17MD0_AEDAE 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158243 SustainPine v3.0 232
AutoFact: HAM group protein n=1 Tax=Dictyostelium discoideum RepID=B0G130_DICDI 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 5.949e-25
Internal
sp_v3.0_unigene158509 SustainPine v3.0 371
AutoFact: Probable protein arginine N-methyltransferase 6.1 n=2 Tax=Oryza sativa RepID=ANM61_ORYSJ 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein arginine N-methyltransferase 3.356e-23
Internal
sp_v3.0_unigene158922 SustainPine v3.0 264
AutoFact: HNRNP arginine N-methyltransferase [Lodderomyces elongisporus NRRL YB-4239] gb|EDK47417.1| HNRNP arginine N-methyltransferase [Lodderomyces elongisporus NRRL YB-4239] 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein arginine N-methyltransferase 8.153e-14
Internal
sp_v3.0_unigene162631 SustainPine v3.0 336
AutoFact: LOB domain-containing protein 29 [Arabidopsis thaliana] sp|Q9M2J7.1|LBD29_ARATH RecName: Full=LOB domain-containing protein 29; AltName: Full=ASYMMETRIC LEAVES 2-like protein 16; Short=AS2-like protein 16 gb|AAL38038.1|AF447893_1 LOB DOMAIN 29 [Arabidopsi 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.487e-35
Putative N-terminus
sp_v3.0_unigene162648 SustainPine v3.0 177
AutoFact: RecName: Full=Lysine-specific histone demethylase 1 homolog 3; AltName: Full=Flavin-containing amine oxidase domain-containing protein 3; AltName: Full=Protein FLOWERING LOCUS D-LIKE; AltName: Full=Protein LSD1-LIKE 3 emb|CAH68056.1| B0103C08-B0602B01.13 3.0e-12
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Flavin-containing amine oxidase domain-containing protein, putative 5.237e-09
Internal
sp_v3.0_unigene163527 SustainPine v3.0 349
AutoFact: histone chaperone ASF1B [Arabidopsis thaliana] sp|Q9LS09.1|ASF1B_ARATH RecName: Full=Histone chaperone ASF1B; AltName: Full=Anti-silencing function protein 1-like protein b; Short=Anti-silencing function 1b protein; AltName: Full=Silencing group A protein 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene163732 SustainPine v3.0 255
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 2.0e-24
FL-Next: sp=Actin-related protein 7; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-related protein ARP7 1.318e-09
Internal
sp_v3.0_unigene165262 SustainPine v3.0 182
AutoFact: Histone chaperone n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPE1_PHYPA 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone chaperone 3.897e-16
N-terminus
sp_v3.0_unigene165333 SustainPine v3.0 156
AutoFact: Unassigned protein
FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 5.788e-07
Internal
sp_v3.0_unigene165513 SustainPine v3.0 239
AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 4.0e-13
FL-Next: sp=Putative histone deacetylase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene165741 SustainPine v3.0 223
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 1.937e-09
Internal
sp_v3.0_unigene166629 SustainPine v3.0 234
AutoFact: Actin-related protein 6 n=2 Tax=Physcomitrella patens RepID=B5B3X5_9BRYO 8.0e-22
FL-Next: sp=Actin-related protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-related protein 6 7.438e-09
N-terminus
sp_v3.0_unigene166652 SustainPine v3.0 211
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-35
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 1.202e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain