Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chromatin modification

Term: GO:0016568  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene118341 SustainPine v3.0 325
• AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I5A8_POPTR 3.0e-28
• FL-Next: sp=Histone-lysine N-methyltransferase ATX4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 7.678e-06
Internal
sp_v3.0_unigene119199 SustainPine v3.0 408
• AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein HIRA 3.602e-13
Internal
sp_v3.0_unigene119610 SustainPine v3.0 530
• AutoFact: p300/CBP acetyltransferase-related protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAD6_PHYPA 0.0
• FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Histone acetyltransferase 1.497e-13
Internal
sp_v3.0_unigene123505 SustainPine v3.0 323
• AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 1.0e-27
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene124519 SustainPine v3.0 209
• AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-30
• FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Histone acetyltransferase 6.244e-14
Internal
sp_v3.0_unigene125390 SustainPine v3.0 273
• AutoFact: Transcription initiation factor TFIID subunit 1 n=5 Tax=Oryza sativa RepID=TAF1_ORYSJ 3.0e-28
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
Internal
sp_v3.0_unigene126569 SustainPine v3.0 1318
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene126916 SustainPine v3.0 421
• AutoFact: guanine nucleotide exchange factor, putative [Plasmodium falciparum 3D7] gb|AAN37020.1| guanine nucleotide exchange factor, putative [Plasmodium falciparum 3D7] 5.0e-06
• Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.646e-14
coding
sp_v3.0_unigene130295 SustainPine v3.0 472
• AutoFact: Os02g0611300 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DZL9_ORYSJ 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 1.35e-10
C-terminus
sp_v3.0_unigene130752 SustainPine v3.0 249
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 3.0e-19
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: E3 ubiquitin-protein ligase BRE1-like 2 2.613e-08
C-terminus
sp_v3.0_unigene130967 SustainPine v3.0 283
• AutoFact: histone acetyltransferase HAC12 [Arabidopsis thaliana] sp|Q9FWQ5.2|HAC12_ARATH RecName: Full=Histone acetyltransferase HAC12 gb|AEE29487.1| histone acetyltransferase HAC12 [Arabidopsis thaliana] 1.4013e-45
• FL-Next: sp=Histone acetyltransferase HAC12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histone acetyltransferase 1.12e-13
Internal
sp_v3.0_unigene131431 SustainPine v3.0 346
• AutoFact: WD-repeat protein RBAP1 [Zea mays] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 6.481e-10
Putative C-terminus
sp_v3.0_unigene131850 SustainPine v3.0 458
• AutoFact: Histone chaperone n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPE1_PHYPA 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone chaperone 6.501e-16
N-terminus
sp_v3.0_unigene133177 SustainPine v3.0 174
• AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-22
• FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
• Sma3: p300/CBP acetyltransferase-related protein 5.451e-09
Internal
sp_v3.0_unigene134517 SustainPine v3.0 265
• AutoFact: histone-lysine N-methyltransferase SUVR4 [Arabidopsis thaliana] sp|Q8W595.2|SUVR4_ARATH RecName: Full=Histone-lysine N-methyltransferase SUVR4; AltName: Full=Protein SET DOMAIN GROUP 31; AltName: Full=Suppressor of variegation 3-9-related protein 4; Short 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Set domain protein, putative 1.33e-10
N-terminus
sp_v3.0_unigene134918 SustainPine v3.0 367
• AutoFact: [KB] COG5137 Histone chaperone involved in gene silencing 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone chaperone 4.946e-16
C-terminus
sp_v3.0_unigene135621 SustainPine v3.0 184
• AutoFact: Trypan_PARP multi-domain protein 6.0e-17
• Sma3: Proline-rich protein 2.935e-11
unknown
sp_v3.0_unigene135965 SustainPine v3.0 373
• AutoFact: Trypan_PARP multi-domain protein 4.0e-17
• Sma3: Proline-rich protein 4.873e-15
coding
sp_v3.0_unigene137750 SustainPine v3.0 190
• AutoFact: histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] sp|Q9M364.2|ATX3_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX3; AltName: Full=Protein SET DOMAIN GROUP 14; AltName: Full=Trithorax-homolog protein 3; Short=TRX-homolog protein 3 4.0e-17
• FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 2.977e-06
Internal
sp_v3.0_unigene138193 SustainPine v3.0 389
• AutoFact: Histone-lysine N-methyltransferase ATXR2 n=2 Tax=Arabidopsis RepID=ATXR2_ARATH 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain