Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31773 SustainPine v3.0 666
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IJZ6_POPTR 2.0e-25
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene32594 SustainPine v3.0 545
• AutoFact: ATP-binding cassette transporter, subfamily B, member 11, group MDR/PGP protein PpABCB11 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U052_PHYPA 5.0e-27
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene33280 SustainPine v3.0 512
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8R3R8_SELML 1.0e-12
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Internal
sp_v3.0_unigene34269 SustainPine v3.0 1646
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene35086 SustainPine v3.0 1033
• AutoFact: ATP-binding cassette transporter, subfamily C, member 2, cluster II, SmABCC2 n=2 Tax=Selaginella moellendorffii RepID=D8RKQ9_SELML 0.0
• FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene35214 SustainPine v3.0 356
• AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IB53_POPTR 4.0e-38
• FL-Next: sp=Putative ABC transporter C family member 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 3.672e-21
Internal
sp_v3.0_unigene36736 SustainPine v3.0 667
• AutoFact: Multidrug resistance-associated protein 1, 3 (Mrp1, 3), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9RIN7_RICCO 0.0
• FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 5.973e-19
Internal
sp_v3.0_unigene37513 SustainPine v3.0 990
• AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 3.99931e-42
• FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: MRP-like ABC transporter 1.837e-06
Internal
sp_v3.0_unigene38781 SustainPine v3.0 1999
• AutoFact: Multidrug resistance-associated protein 1, 3 (Mrp1, 3), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SN54_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38823 SustainPine v3.0 459
• AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene38832 SustainPine v3.0 509
• AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene41873 SustainPine v3.0 929
• AutoFact: ABC transporter family protein (Fragment) n=3 Tax=Populus trichocarpa RepID=B9N4E9_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene42656 SustainPine v3.0 567
• AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 1.0e-36
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene42937 SustainPine v3.0 261
• AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 7.0e-31
• FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 4.527e-06
Internal
sp_v3.0_unigene43206 SustainPine v3.0 154
• AutoFact: Multidrug resistance-associated protein 1 n=1 Tax=Phaseolus vulgaris RepID=E3Q0A7_PHAVU 1.0e-16
• FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.342e-06
Internal
sp_v3.0_unigene44131 SustainPine v3.0 441
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 4.00001e-40
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene44663 SustainPine v3.0 445
• AutoFact: Multidrug resistance protein 1, 2, putative n=1 Tax=Ricinus communis RepID=B9RUH8_RICCO 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.688e-22
Internal
sp_v3.0_unigene44681 SustainPine v3.0 506
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RBJ7_SELML 0.0
• FL-Next: sp=ABC transporter B family member 29, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene44855 SustainPine v3.0 462
• AutoFact: ABC transporter B family member 2 n=2 Tax=Arabidopsis RepID=AB2B_ARATH 3.0e-33
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene45258 SustainPine v3.0 251
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Populus trichocarpa RepID=B9I9B8_POPTR 4.0e-29
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 3.058e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain