Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4270 SustainPine v3.0 982
AutoFact: Plasma membrane ATPase 4 n=3 Tax=Solanaceae RepID=PMA4_NICPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plasma membrane H+-ATPase 0.0
C-terminus
sp_v3.0_unigene4531 SustainPine v3.0 607
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene4743 SustainPine v3.0 551
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.955e-16
Putative N-terminus
sp_v3.0_unigene5301 SustainPine v3.0 3803
AutoFact: Golgi transport complex-related protein [Arabidopsis thaliana] gb|AAG52007.1|AC012563_17 putative golgi transport complex protein; 67058-70172 [Arabidopsis thaliana] gb|AEE34723.1| Golgi transport complex-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 8.691e-08
Complete
sp_v3.0_unigene5338 SustainPine v3.0 2100
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Replication protein A1 2.194e-08
Complete
sp_v3.0_unigene5465 SustainPine v3.0 2433
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 28 2.786e-08
Putative C-terminus
sp_v3.0_unigene5804 SustainPine v3.0 1945
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein At2g45500 9.027e-08
Complete
sp_v3.0_unigene5912 SustainPine v3.0 2791
AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6273 SustainPine v3.0 2140
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6367 SustainPine v3.0 2712
AutoFact: ATP-dependent RNA helicase DHX8/PRP22 [Arabidopsis thaliana] sp|Q38953.2|DHX8_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase dbj|BAB01838.1| pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis th 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.56e-40
N-terminus
sp_v3.0_unigene6406 SustainPine v3.0 3309
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene6494 SustainPine v3.0 2143
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 3.151e-12
Putative Complete
sp_v3.0_unigene6591 SustainPine v3.0 1352
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Chromosome chr6 scaffold_28, whole genome shotgun sequence 7.264e-06
N-terminus
sp_v3.0_unigene6666 SustainPine v3.0 3232
AutoFact: ISWI chromatin remodeling complex ATPase ISW1, putative n=1 Tax=Ricinus communis RepID=B9S6I7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 1.796e-12
Complete
sp_v3.0_unigene6672 SustainPine v3.0 2958
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene6762 SustainPine v3.0 2672
AutoFact: pre-mRNA-splicing factor 38B [Arabidopsis thaliana] gb|AAM13215.1| unknown protein [Arabidopsis thaliana] gb|AAP68295.1| At5g37370 [Arabidopsis thaliana] gb|AED94173.1| pre-mRNA-splicing factor 38B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6870 SustainPine v3.0 1068
AutoFact: Putative DNA-binding protein n=2 Tax=Arabidopsis thaliana RepID=O81047_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein smubp-2, putative 5.596e-09
C-terminus
sp_v3.0_unigene6890 SustainPine v3.0 1026
AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 7.19e-13
Putative Complete
sp_v3.0_unigene7109 SustainPine v3.0 2504
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.469e-18
Complete
sp_v3.0_unigene7374 SustainPine v3.0 2555
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.311e-24
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain