Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene149892 SustainPine v3.0 334
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene152597 SustainPine v3.0 560
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene152602 SustainPine v3.0 479
AutoFact: importin alpha 1 [Capsicum annuum] 1.4013e-45
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Importin alpha, putative 5.416e-18
Internal
sp_v3.0_unigene154826 SustainPine v3.0 332
AutoFact: karyopherin alpha subunit, putative [Neosartorya fischeri NRRL 181] gb|EAW19176.1| karyopherin alpha subunit, putative [Neosartorya fischeri NRRL 181] 5.0e-30
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Importin alpha-like protein 1.714e-14
Internal
sp_v3.0_unigene155826 SustainPine v3.0 492
AutoFact: putative importin alpha [Trifolium pratense] 3.0e-26
FL-Next: sp=Importin subunit alpha-1b; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Importin alpha, putative 1.731e-18
C-terminus
sp_v3.0_unigene158159 SustainPine v3.0 303
AutoFact: Putative importin subunit alpha B n=1 Tax=Dictyostelium fasciculatum RepID=F4QFF7_9MYCE 4.0e-30
FL-Next: sp=Importin subunit alpha-1a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Importin alpha-like protein 1.58e-14
Internal
sp_v3.0_unigene158403 SustainPine v3.0 507
AutoFact: PREDICTED: importin subunit beta-1 isoform 1 n=1 Tax=Apis mellifera RepID=UPI0002063ABB 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-1, putative 1.858e-08
Internal
sp_v3.0_unigene159861 SustainPine v3.0 249
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-1, putative 6.096e-09
N-terminus
sp_v3.0_unigene160503 SustainPine v3.0 492
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.114e-06
Internal
sp_v3.0_unigene162731 SustainPine v3.0 254
AutoFact: putative nucleoporin PRECOZ [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene164819 SustainPine v3.0 276
AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165765 SustainPine v3.0 368
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-38
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.311e-32
Putative C-terminus
sp_v3.0_unigene166391 SustainPine v3.0 416
AutoFact: Importin alpha-like protein n=5 Tax=Arabidopsis RepID=O49600_ARATH 4.0e-14
FL-Next: sp=Importin subunit alpha-1a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Importin alpha, putative 1.367e-15
Internal
sp_v3.0_unigene166680 SustainPine v3.0 339
AutoFact: Importin alpha-like protein [Arabidopsis thaliana] 1.0e-29
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Importin alpha, putative 4.95e-18
Internal
sp_v3.0_unigene166933 SustainPine v3.0 251
AutoFact: HASTY [Arabidopsis thaliana] 3.0e-16
FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At3g05040 6.546e-10
Internal
sp_v3.0_unigene188995 SustainPine v3.0 1093
AutoFact: Zeatin O-glucosyltransferase n=1 Tax=Phaseolus lunatus RepID=ZOG_PHALU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucosyltransferase, putative 2.10195e-44
C-terminus
sp_v3.0_unigene190512 SustainPine v3.0 533
AutoFact: Putative C-terminal motor kinesin n=1 Tax=Leishmania braziliensis RepID=A4H9Y3_LEIBR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin-like protein 3.596e-20
Internal
sp_v3.0_unigene193968 SustainPine v3.0 570
AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-39
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.18e-18
C-terminus
sp_v3.0_unigene194082 SustainPine v3.0 240
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Putative Nuclear pore complex protein Nup155 5.361e-06
Putative Complete
sp_v3.0_unigene194284 SustainPine v3.0 425
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain