Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromosome

Term: GO:0005694  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58359 SustainPine v3.0 232
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 4.0e-12
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 1.459e-38
Internal
sp_v3.0_unigene58528 SustainPine v3.0 221
AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 4.0e-10
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 4.921e-32
Internal
sp_v3.0_unigene59594 SustainPine v3.0 359
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene60882 SustainPine v3.0 213
AutoFact: Unassigned protein
FL-Next: tr=Structural maintenance of chromosome, putative; Ricinus communis (Castor bean). 0.0
Sma3: SMC3 protein 1.05e-09
Internal
sp_v3.0_unigene61569 SustainPine v3.0 325
AutoFact: Unassigned protein
FL-Next: sp=Structural maintenance of chromosomes protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene62162 SustainPine v3.0 257
AutoFact: DNA topoisomerase III [Arabidopsis thaliana] dbj|BAA96895.1| DNA topoisomerase III [Arabidopsis thaliana] gb|ACA50279.1| topoisomerase 3 alpha [Arabidopsis thaliana] gb|AED97816.1| DNA topoisomerase III [Arabidopsis thaliana] 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene62199 SustainPine v3.0 308
AutoFact: myosin [Arabidopsis thaliana] dbj|BAD94158.1| myosin [Arabidopsis thaliana] dbj|BAD94177.1| myosin [Arabidopsis thaliana] 9.99995e-41
FL-Next: tr=Myosin; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Myosin XI, putative 8.838e-19
Internal
sp_v3.0_unigene63970 SustainPine v3.0 229
AutoFact: DNA topoisomerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U3N3_PHYPA 3.0e-25
FL-Next: sp=DNA topoisomerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative DNA topoisomerase III beta 1.635e-08
Internal
sp_v3.0_unigene64887 SustainPine v3.0 206
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Ricinus communis RepID=B9SN22_RICCO 2.0e-18
FL-Next: sp=DNA topoisomerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene65103 SustainPine v3.0 257
AutoFact: Probable DNA gyrase subunit A, chloroplastic/mitochondrial n=2 Tax=Arabidopsis RepID=GYRA_ARATH 2.0e-16
FL-Next: sp=Probable DNA gyrase subunit A, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65245 SustainPine v3.0 267
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-20
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Integrase 3.664e-09
Putative C-terminus
sp_v3.0_unigene65357 SustainPine v3.0 113
AutoFact: serine/threonine-protein kinase ATR [Arabidopsis thaliana] sp|Q9FKS4.2|ATR_ARATH RecName: Full=Serine/threonine-protein kinase ATR; Short=AtATR; AltName: Full=Ataxia telangiectasia-mutated and Rad3-related homolog; AltName: Full=DNA repair protein ATR; Al 3.0e-13
FL-Next: sp=Serine/threonine-protein kinase ATR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine-protein kinase ATR 1.975e-08
Internal
sp_v3.0_unigene65712 SustainPine v3.0 353
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Facilitates chromatin transcription complex subunit SPT16 3.108e-13
Internal
sp_v3.0_unigene66479 SustainPine v3.0 344
AutoFact: peroxin 6 [Helianthus annuus] 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68134 SustainPine v3.0 268
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene69505 SustainPine v3.0 205
AutoFact: DNA topoisomerase n=1 Tax=Tribolium castaneum RepID=D2A047_TRICA 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene71560 SustainPine v3.0 278
AutoFact: RVT_1 domain containing protein 5.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 5.4e-06
Putative C-terminus
sp_v3.0_unigene71635 SustainPine v3.0 503
AutoFact: serine/threonine-protein kinase ATR [Arabidopsis thaliana] sp|Q9FKS4.2|ATR_ARATH RecName: Full=Serine/threonine-protein kinase ATR; Short=AtATR; AltName: Full=Ataxia telangiectasia-mutated and Rad3-related homolog; AltName: Full=DNA repair protein ATR; Al 0.0
FL-Next: sp=Serine/threonine-protein kinase ATR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine-protein kinase ATR 4.294e-08
Internal
sp_v3.0_unigene71660 SustainPine v3.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene72143 SustainPine v3.0 341
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-31
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain