Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene164548 SustainPine v3.0 218
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 7.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.892e-18
Putative C-terminus
sp_v3.0_unigene165036 SustainPine v3.0 290
AutoFact: Polyprotein n=1 Tax=Sorghum bicolor RepID=Q9XE68_SORBI 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene166490 SustainPine v3.0 362
AutoFact: Putative alpha-expansin (Fragment) n=1 Tax=Eucalyptus globulus RepID=Q4F8J9_EUCGL 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene166626 SustainPine v3.0 193
AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.858e-20
Putative C-terminus
sp_v3.0_unigene166889 SustainPine v3.0 173
AutoFact: putative multispanning membrane protein [Populus tremula x Populus alba] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane 9 superfamily protein member 1 1.76e-12
Internal
sp_v3.0_unigene167343 SustainPine v3.0 243
AutoFact: Putative expansin n=1 Tax=Gerbera hybrid cultivar RepID=B6CJW6_GERHY 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene167638 SustainPine v3.0 160
AutoFact: SUMO-activating enzyme subunit 2 n=2 Tax=Arabidopsis thaliana RepID=F4IHI1_ARATH 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SUMO1 activating enzyme subunit 2 9.453e-09
Internal
sp_v3.0_unigene179165 SustainPine v3.0 406
AutoFact: GIY-YIG endonuclease [Fusarium oxysporum] 6.99949e-42
putative_coding
sp_v3.0_unigene184300 SustainPine v3.0 534
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene186369 SustainPine v3.0 382
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene187353 SustainPine v3.0 274
AutoFact: Unassigned protein
FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Retrotransposon protein, putative, unclassified 9.658e-23
Internal
sp_v3.0_unigene187426 SustainPine v3.0 450
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 3.00018e-42
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.176e-21
N-terminus
sp_v3.0_unigene187503 SustainPine v3.0 434
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 3.0e-25
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Polyprotein 1.576e-17
C-terminus
sp_v3.0_unigene187553 SustainPine v3.0 552
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.101e-21
Putative Complete
sp_v3.0_unigene188256 SustainPine v3.0 402
AutoFact: polyprotein [Glycine max] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Polyprotein 2.354e-06
Internal
sp_v3.0_unigene188397 SustainPine v3.0 378
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Acramoeba dendroida RepID=D0PPF3_9EUKA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene188490 SustainPine v3.0 491
AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=stramenopiles RepID=Q2TTF1_9STRA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 8.709e-16
Internal
sp_v3.0_unigene188661 SustainPine v3.0 401
AutoFact: Expansin 1 n=1 Tax=Cunninghamia lanceolata RepID=A1E2V1_CUNLA 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene188678 SustainPine v3.0 312
AutoFact: Expansin-A15 n=3 Tax=Arabidopsis RepID=EXP15_ARATH 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene189160 SustainPine v3.0 874
AutoFact: MtN3_slv domain containing protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c oxidoreductase 6.638e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain