Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene67132 SustainPine v3.0 352
• AutoFact: 3-methylcrotonyl-CoA carboxylase, biotin-carrier domain [Glycine max] 1.0e-20
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.093e-13
Internal
sp_v3.0_unigene67284 SustainPine v3.0 266
• AutoFact: Clathrin assembly protein AP180 short form-like n=2 Tax=Oryza sativa RepID=Q5N9P9_ORYSJ 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin assembly protein, putative 9.063e-07
Internal
sp_v3.0_unigene70362 SustainPine v3.0 364
• AutoFact: RVT_1 domain containing protein 2.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.452e-12
Putative C-terminus
sp_v3.0_unigene70745 SustainPine v3.0 361
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-34
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene71029 SustainPine v3.0 405
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.159e-08
Putative Complete
sp_v3.0_unigene71190 SustainPine v3.0 271
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 3.0e-14
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene72225 SustainPine v3.0 344
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q53P05_ORYSJ 1.0e-21
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.085e-12
Putative N-terminus
sp_v3.0_unigene72279 SustainPine v3.0 221
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 4.0e-15
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene72804 SustainPine v3.0 167
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72908 SustainPine v3.0 239
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene73665 SustainPine v3.0 319
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=1 Tax=Macrolepiota mastoidea RepID=F1B353_9AGAR 4.0e-39
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.716e-33
Internal
sp_v3.0_unigene73753 SustainPine v3.0 451
• AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene73900 SustainPine v3.0 420
• AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Agaricales RepID=Q2HXZ3_9AGAR 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.638e-25
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene74361 SustainPine v3.0 411
• AutoFact: putative ubiquitin activating enzyme E1 [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Magnesium transporter 1.528e-12
N-terminus
sp_v3.0_unigene74368 SustainPine v3.0 446
• AutoFact: Biotin/lipoyl attachment:Carbamoyl-phosphate synthase subunit L n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=D6RJR4_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA carboxylase 2.793e-11
Internal
sp_v3.0_unigene74555 SustainPine v3.0 379
• AutoFact: translation elongation factor-1 alpha [Picea abies] 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.3936e-42
Internal
sp_v3.0_unigene75512 SustainPine v3.0 261
• AutoFact: Unassigned protein 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75656 SustainPine v3.0 234
• AutoFact: Protein virR, putative n=1 Tax=Ricinus communis RepID=B9T0H6_RICCO 2.0e-25
• FL-Next: tr=Protein virR, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene76157 SustainPine v3.0 357
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.832e-19
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain