Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20934 SustainPine v3.0 520
AutoFact: Thioredoxin (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9ST39_PHYPA 1.0e-13
FL-Next: sp=Thioredoxin-like protein CITRX, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative thioredoxin 3.859e-07
Putative Complete
sp_v3.0_unigene20947 SustainPine v3.0 1424
AutoFact: Peroxiredoxin, putative n=1 Tax=Ricinus communis RepID=B9SRG0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxiredoxin 2.261e-15
Complete
sp_v3.0_unigene21228 SustainPine v3.0 845
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ELIP 2.23e-21
Complete
sp_v3.0_unigene21245 SustainPine v3.0 2656
AutoFact: RuBisCO large subunit-binding protein subunit alpha n=3 Tax=Andropogoneae RepID=B6SXW8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: groEL protein 2.72973e-42
Complete
sp_v3.0_unigene21382 SustainPine v3.0 983
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.593e-32
Complete
sp_v3.0_unigene21573 SustainPine v3.0 1325
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.201e-28
Complete
sp_v3.0_unigene22044 SustainPine v3.0 566
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=NDK_CYAP4 0.0
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene22062 SustainPine v3.0 560
AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 8.0e-21
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.62e-06
C-terminus
sp_v3.0_unigene22153 SustainPine v3.0 1404
AutoFact: Fiber annexin n=2 Tax=Gossypium hirsutum RepID=O82090_GOSHI 0.0
FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Annexin 2.227e-23
Complete
sp_v3.0_unigene22670 SustainPine v3.0 1368
AutoFact: pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Quinone oxidoreductase-like protein 5.951e-07
Complete
sp_v3.0_unigene22933 SustainPine v3.0 686
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND55_PHYIT 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene22952 SustainPine v3.0 693
AutoFact: 2-cys peroxiredoxin n=2 Tax=Chlamydomonadales RepID=A8I2V3_CHLRE 0.0
FL-Next: tr=2-cys peroxiredoxin; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Thioredoxin peroxidase 5.284e-16
Complete
sp_v3.0_unigene23054 SustainPine v3.0 618
AutoFact: Nucleoside diphosphate kinase n=4 Tax=Daphnia pulex RepID=E9FZ29_DAPPU 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23416 SustainPine v3.0 634
AutoFact: Alkyl hydroperoxide reductase, thiol specific antioxidant, putative n=2 Tax=Ixodes RepID=B7Q8W6_IXOSC 0.0
FL-Next: tr=2-cys peroxiredoxin; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Putative peroxiredoxin ycf42 4.69e-19
Complete
sp_v3.0_unigene23650 SustainPine v3.0 511
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWH2_9EUKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23662 SustainPine v3.0 524
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWH2_9EUKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23667 SustainPine v3.0 1663
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.899e-13
Putative C-terminus
sp_v3.0_unigene23767 SustainPine v3.0 601
AutoFact: PsbP domain-containing protein 2 [Arabidopsis thaliana] sp|Q8VY52.1|PPD2_ARATH RecName: Full=PsbP domain-containing protein 2, chloroplastic; AltName: Full=PsbP-related thylakoid lumenal protein 3; Flags: Precursor gb|AAL62434.1| unknown protein [Arabidop 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24503 SustainPine v3.0 604
AutoFact: PREDICTED: similar to MGC82793 protein isoform 2 [Gallus gallus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin peroxidase 1.708e-19
C-terminus
sp_v3.0_unigene24632 SustainPine v3.0 844
AutoFact: Probable IPP1-inorganic pyrophosphatase n=2 Tax=Ustilaginaceae RepID=E6ZVN1_9BASI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inorganic pyrophosphatase 6.17e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain