Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79 SustainPine v3.0 2456
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene126 SustainPine v3.0 1931
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 2.932e-16
Putative Complete
sp_v3.0_unigene143 SustainPine v3.0 1912
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RZ39_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene162 SustainPine v3.0 3761
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SIN3 component, histone deacetylase complex 5.308e-09
C-terminus
sp_v3.0_unigene640 SustainPine v3.0 1987
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-tubulin 2.28e-13
Complete
sp_v3.0_unigene651 SustainPine v3.0 5190
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SJP9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 4.848e-18
Complete
sp_v3.0_unigene789 SustainPine v3.0 3029
AutoFact: protein phosphatase 2c, putative (EC:3.1.3.16) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene954 SustainPine v3.0 2283
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SJP9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 2.846e-18
Complete
sp_v3.0_unigene990 SustainPine v3.0 2342
AutoFact: phosphoinositide phosphatase-like protein [Arabidopsis thaliana] gb|AAQ13339.1|AF266460_1 FIG4-like protein AtFIG4 [Arabidopsis thaliana] gb|AAP49834.1| SAC domain protein 1 [Arabidopsis thaliana] gb|AEE30261.1| phosphoinositide phosphatase-like protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoinositide 5-phosphatase, putative 5.199e-13
C-terminus
sp_v3.0_unigene1106 SustainPine v3.0 1183
AutoFact: Stachyose synthase, putative n=1 Tax=Ricinus communis RepID=B9SXA4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alkaline alpha galactosidase 1.988e-12
C-terminus
sp_v3.0_unigene1204 SustainPine v3.0 1326
AutoFact: NAM-like protein [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene1363 SustainPine v3.0 2018
AutoFact: putative lipid phosphate phosphatase 3 [Arabidopsis thaliana] sp|Q8LFD1.1|LPP3_ARATH RecName: Full=Putative lipid phosphate phosphatase 3, chloroplastic; Short=AtLPP3; AltName: Full=Phosphatidate phosphohydrolase 3; AltName: Full=Phosphatidic acid phospha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidic acid phosphatase, putative 4.274e-12
Complete
sp_v3.0_unigene1518 SustainPine v3.0 1621
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Myosin XI 4.089e-27
Complete
sp_v3.0_unigene1554 SustainPine v3.0 1048
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RQX7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Myosin XI, putative 8.464e-23
Internal
sp_v3.0_unigene2059 SustainPine v3.0 2411
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2119 SustainPine v3.0 1268
AutoFact: protein phosphatase 2c-like protein [Eutrema halophilum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 2.547e-15
C-terminus
sp_v3.0_unigene2383 SustainPine v3.0 2243
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SXJ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 9.395e-18
Complete
sp_v3.0_unigene2526 SustainPine v3.0 1843
AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2653 SustainPine v3.0 1788
AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AML1 8.073e-26
C-terminus
sp_v3.0_unigene2770 SustainPine v3.0 1358
AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 0.0
FL-Next: sp=NAC domain-containing protein 68; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain