Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene56014
|
SustainPine v3.0
|
460
|
• AutoFact: reverse transcriptase [Taxus baccata]
|
1.99993e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
sp_v3.0_unigene56141
|
SustainPine v3.0
|
474
|
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO
|
7.0e-34
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
5.699e-27
|
|
Putative Complete
|
sp_v3.0_unigene56226
|
SustainPine v3.0
|
409
|
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A
|
9.0e-24
|
• FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet).
|
0.0
|
|
Internal
|
sp_v3.0_unigene56267
|
SustainPine v3.0
|
340
|
• AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ
|
2.0e-33
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
1.204e-11
|
|
C-terminus
|
sp_v3.0_unigene56377
|
SustainPine v3.0
|
386
|
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF
|
6.0e-38
|
• FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
3.525e-11
|
|
Internal
|
sp_v3.0_unigene56380
|
SustainPine v3.0
|
413
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
2.0e-30
|
• FL-Next: tr=Polyprotein; Primula vulgaris.
|
0.0
|
|
Internal
|
sp_v3.0_unigene56411
|
SustainPine v3.0
|
263
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE
|
2.0e-20
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.223e-23
|
|
Internal
|
sp_v3.0_unigene56444
|
SustainPine v3.0
|
435
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
9.0e-29
|
• FL-Next: tr=Polyprotein; Primula vulgaris.
|
0.0
|
• Sma3: Pol protein integrase region
|
3.117e-25
|
|
Internal
|
sp_v3.0_unigene56445
|
SustainPine v3.0
|
367
|
• AutoFact: zf-H2C2 domain containing protein
|
0.0001
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
sp_v3.0_unigene56506
|
SustainPine v3.0
|
516
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.365e-29
|
|
Putative Complete
|
sp_v3.0_unigene56519
|
SustainPine v3.0
|
261
|
• AutoFact: Unassigned protein
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.134e-13
|
|
Putative Complete
|
sp_v3.0_unigene56571
|
SustainPine v3.0
|
397
|
• AutoFact: Putative retroelement integrase n=1 Tax=Arabidopsis thaliana RepID=Q8S8M1_ARATH
|
5.0e-35
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.436e-26
|
|
C-terminus
|
sp_v3.0_unigene56575
|
SustainPine v3.0
|
143
|
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q7Y1L5_ORYSJ
|
2.0e-12
|
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
Internal
|
sp_v3.0_unigene56643
|
SustainPine v3.0
|
348
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
3.0e-25
|
• FL-Next: tr=Putative uncharacterized protein Sb07g011900; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
5.819e-37
|
|
Internal
|
sp_v3.0_unigene56693
|
SustainPine v3.0
|
413
|
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558
|
8.0e-19
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene56722
|
SustainPine v3.0
|
418
|
• AutoFact: polyprotein [Glycine max]
|
1.0e-28
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
Putative C-terminus
|
sp_v3.0_unigene56738
|
SustainPine v3.0
|
397
|
• AutoFact: Hydroxyproline-rich glycoprotein family protein n=3 Tax=Arabidopsis RepID=Q9LZ00_ARATH
|
1.0e-23
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene56740
|
SustainPine v3.0
|
500
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.687e-35
|
|
N-terminus
|
sp_v3.0_unigene56794
|
SustainPine v3.0
|
414
|
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA
|
1.0e-38
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
5.965e-09
|
|
Putative Complete
|
sp_v3.0_unigene56803
|
SustainPine v3.0
|
426
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
1.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.146e-30
|
|
Internal
|