Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene209585 SustainPine v3.0 933
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 6.041e-19
N-terminus
sp_v3.0_unigene209650 SustainPine v3.0 296
AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.437e-12
N-terminus
sp_v3.0_unigene209687 SustainPine v3.0 588
AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ZF-HD homeobox protein 4.7e-16
Putative Complete
sp_v3.0_unigene209691 SustainPine v3.0 823
AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 7.451e-11
C-terminus
sp_v3.0_unigene209729 SustainPine v3.0 496
AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 5.914e-14
N-terminus
sp_v3.0_unigene209829 SustainPine v3.0 543
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 6.0e-25
FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 6.252e-28
N-terminus
sp_v3.0_unigene210017 SustainPine v3.0 247
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 7.8e-30
Putative N-terminus
sp_v3.0_unigene210054 SustainPine v3.0 731
AutoFact: heat shock factor RHSF1 [Oryza sativa Japonica Group] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat stress transcription factor A-6a 6.214e-08
Internal
sp_v3.0_unigene210116 SustainPine v3.0 417
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ethylene signal transcription factor 1.312e-15
N-terminus
sp_v3.0_unigene210238 SustainPine v3.0 865
AutoFact: PREDICTED: similar to oligopeptide transporter, putative n=1 Tax=Vitis vinifera RepID=UPI0001985618 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.076e-26
C-terminus
sp_v3.0_unigene210246 SustainPine v3.0 535
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.614e-25
Internal
sp_v3.0_unigene210259 SustainPine v3.0 1208
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 1.149e-09
C-terminus
sp_v3.0_unigene210266 SustainPine v3.0 1048
AutoFact: Auxin response factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBL7_CUCME 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 1.624e-34
Putative N-terminus
sp_v3.0_unigene210285 SustainPine v3.0 1029
AutoFact: ERF transcription factor n=1 Tax=Solanum tuberosum RepID=A4ZX83_SOLTU 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.31162e-42
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain