Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2824 SustainPine v3.0 442
AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] dbj|BAC42143.1| putative bzip transcription factor atbzip23 [Arabidopsis thaliana] gb|ABI93931.1| At2g16770 [Arabidopsis thaliana] gb|AEC06536.1| basic helix-loop-helix domain-contain 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene2912 SustainPine v3.0 1919
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.01e-20
C-terminus
sp_v3.0_unigene3007 SustainPine v3.0 5125
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Gag-Pol polyprotein 6.984e-08
Complete
sp_v3.0_unigene3164 SustainPine v3.0 4013
AutoFact: Phospholipid-transporting atpase, putative n=1 Tax=Ricinus communis RepID=B9SRT5_RICCO 0.0
FL-Next: sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Aminophospholipid ATPase 1.662e-16
C-terminus
sp_v3.0_unigene3189 SustainPine v3.0 3992
AutoFact: Nop14 multi-domain protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3196 SustainPine v3.0 2305
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 25 8.568e-15
Complete
sp_v3.0_unigene3203 SustainPine v3.0 1068
AutoFact: RAD-like 6 protein [Arabidopsis thaliana] gb|ABD24442.1| RAD-like protein 6 [Arabidopsis thaliana] gb|AEE35694.1| RAD-like 6 protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RADIALIS 4.403e-15
Complete
sp_v3.0_unigene3305 SustainPine v3.0 4215
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 1.959e-11
Complete
sp_v3.0_unigene3315 SustainPine v3.0 1607
AutoFact: ZF-HD homeobox protein [Flaveria bidentis] 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger-homeodomain protein 1 1.381e-24
C-terminus
sp_v3.0_unigene3385 SustainPine v3.0 1000
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.808e-22
Putative C-terminus
sp_v3.0_unigene3398 SustainPine v3.0 996
AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 4.196e-11
C-terminus
sp_v3.0_unigene3436 SustainPine v3.0 1682
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3444 SustainPine v3.0 3832
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Associated with HOX family protein, expressed 6.029e-15
Complete
sp_v3.0_unigene3463 SustainPine v3.0 1474
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
FL-Next: sp=WUSCHEL-related homeobox 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative wuschel homeobox protein 5.629e-07
Complete
sp_v3.0_unigene3467 SustainPine v3.0 2205
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene3491 SustainPine v3.0 938
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 3.515e-38
Putative Complete
sp_v3.0_unigene3638 SustainPine v3.0 1240
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 2.0e-39
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Complete
sp_v3.0_unigene3639 SustainPine v3.0 1351
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Complete
sp_v3.0_unigene3747 SustainPine v3.0 1961
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene3780 SustainPine v3.0 2994
AutoFact: homeodomain protein HOX3 [Gossypium hirsutum] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 7.562e-18
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain