Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene47102 SustainPine v3.0 258
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 5.0e-21
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 9.16e-08
Internal
sp_v3.0_unigene47403 SustainPine v3.0 1261
• AutoFact: NAC domain containing protein 36 [Arabidopsis thaliana] gb|AEC06578.1| NAC domain containing protein 36 [Arabidopsis thaliana] 1.00053e-42
• FL-Next: sp=NAC domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: NAC domain protein, IPR003441 1.893e-40
Complete
sp_v3.0_unigene47922 SustainPine v3.0 525
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 3.0e-33
• FL-Next: tr=Peptide transporter PTR2; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.215e-24
Complete
sp_v3.0_unigene47967 SustainPine v3.0 1538
• AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 8.40779e-45
C-terminus
sp_v3.0_unigene48085 SustainPine v3.0 2721
• AutoFact: NAM [Petunia x hybrida] emb|CAA63102.2| NAM [Petunia x hybrida] 0.0
• FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene48124 SustainPine v3.0 440
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene48445 SustainPine v3.0 185
• AutoFact: EIN3a transcription factor (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SK60_PHYPA 3.0e-28
• FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ethylene signal transcription factor 1.586e-15
Internal
sp_v3.0_unigene48931 SustainPine v3.0 782
• AutoFact: Type B response regulator n=2 Tax=Selaginella moellendorffii RepID=D8SC74_SELML 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 1.08e-26
N-terminus
sp_v3.0_unigene49394 SustainPine v3.0 350
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 3.0e-36
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene49451 SustainPine v3.0 1044
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 6.77e-26
N-terminus
sp_v3.0_unigene49565 SustainPine v3.0 846
• AutoFact: homeobox-leucine zipper protein HAT9 [Arabidopsis thaliana] sp|P46603.2|HAT9_ARATH RecName: Full=Homeobox-leucine zipper protein HAT9; AltName: Full=Homeodomain-leucine zipper protein HAT9; Short=HD-ZIP protein 9 gb|AAC32427.1| homeodomain transcription f 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 7.353e-17
Putative C-terminus
sp_v3.0_unigene49643 SustainPine v3.0 1698
• AutoFact: bZIP transcription factor BZI-2 [Nicotiana tabacum] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ocs element-binding factor, putative 6.715e-08
Putative Complete
sp_v3.0_unigene49697 SustainPine v3.0 1740
• AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene49784 SustainPine v3.0 714
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene49816 SustainPine v3.0 249
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.511e-14
Internal
sp_v3.0_unigene49917 SustainPine v3.0 298
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 3.0e-33
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 2.362e-17
Internal
sp_v3.0_unigene49924 SustainPine v3.0 365
• AutoFact: OSJNBa0091D06.8 protein n=1 Tax=Oryza sativa RepID=Q7XU13_ORYSA 4.0e-28
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.12e-10
Internal
sp_v3.0_unigene49968 SustainPine v3.0 244
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MKQ2_9ASPA 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 5.418e-36
Internal
sp_v3.0_unigene49983 SustainPine v3.0 735
• AutoFact: Homeobox domain containing protein 9.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WUSCHEL-related homeobox 14 3.097e-08
N-terminus
sp_v3.0_unigene50139 SustainPine v3.0 922
• AutoFact: PREDICTED: ripening-related bZIP protein-like isoform 2 [Vitis vinifera] ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-like isoform 1 [Vitis vinifera] emb|CAB85632.1| putative ripening-related bZIP protein [Vitis vinifera] 1.0e-38
• FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: BZIP transcription factor 5.597e-18
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain