Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene38760 SustainPine v3.0 1138
AutoFact: Putative ethylene responsive element binding protein n=1 Tax=Gossypium hirsutum RepID=Q3KZ43_GOSHI 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 9.314e-22
N-terminus
sp_v3.0_unigene38761 SustainPine v3.0 1158
AutoFact: Putative ethylene responsive element binding protein n=1 Tax=Gossypium hirsutum RepID=Q3KZ43_GOSHI 3.0e-19
FL-Next: sp=Ethylene-responsive transcription factor ERF071; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AP2/ERF domain-containing transcription factor 9.045e-23
Complete
sp_v3.0_unigene38784 SustainPine v3.0 679
AutoFact: NDX1 homeobox protein n=1 Tax=Lotus japonicus RepID=Q9ZRY4_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene38878 SustainPine v3.0 726
AutoFact: UbiA domain containing protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene38957 SustainPine v3.0 300
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene39154 SustainPine v3.0 682
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.932e-17
Internal
sp_v3.0_unigene39359 SustainPine v3.0 835
AutoFact: K-box domain containing protein 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene39972 SustainPine v3.0 326
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Internal
sp_v3.0_unigene40017 SustainPine v3.0 283
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-23
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.234e-36
Internal
sp_v3.0_unigene40101 SustainPine v3.0 1497
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.34e-07
Internal
sp_v3.0_unigene40357 SustainPine v3.0 399
AutoFact: GATA transcription factor 18 n=3 Tax=Arabidopsis RepID=GAT18_ARATH 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein-like 3.099e-08
Internal
sp_v3.0_unigene40604 SustainPine v3.0 697
AutoFact: Unassigned protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene40663 SustainPine v3.0 1535
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 4.918e-29
Complete
sp_v3.0_unigene40741 SustainPine v3.0 827
AutoFact: putative dehydration-responsive element binding protein [Broussonetia papyrifera] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.12104e-44
C-terminus
sp_v3.0_unigene40753 SustainPine v3.0 628
AutoFact: transcription factor TCP15 [Arabidopsis thaliana] sp|Q9C9L2.1|TCP15_ARATH RecName: Full=Transcription factor TCP15 gb|AAG52540.1|AC013289_7 unknown protein; 54453-53476 [Arabidopsis thaliana] gb|AAL08240.1| At1g69690/T6C23_11 [Arabidopsis thaliana] gb|AAL 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor, putative 2.542e-15
Putative N-terminus
sp_v3.0_unigene40758 SustainPine v3.0 750
AutoFact: homeobox-leucine zipper protein [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 4.625e-19
Internal
sp_v3.0_unigene40775 SustainPine v3.0 1452
AutoFact: Casein kinase, putative n=1 Tax=Ricinus communis RepID=B9RK86_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 9.331e-26
Putative C-terminus
sp_v3.0_unigene40858 SustainPine v3.0 1794
AutoFact: casein kinase [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 3.019e-33
Complete
sp_v3.0_unigene40943 SustainPine v3.0 564
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.658e-33
Internal
sp_v3.0_unigene41003 SustainPine v3.0 2588
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.424e-18
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain