Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene34147 SustainPine v3.0 1098
• AutoFact: NAC, putative n=4 Tax=Arabidopsis RepID=Q9SQY1_ARATH 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene34155 SustainPine v3.0 1883
• AutoFact: putative RAV2-like DNA-binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Putative AP2 domain containing protein RAP2.8 5.668e-08
Complete
sp_v3.0_unigene34237 SustainPine v3.0 2013
• AutoFact: basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.276e-20
Putative Complete
sp_v3.0_unigene34484 SustainPine v3.0 791
• AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 1.358e-23
Complete
sp_v3.0_unigene34495 SustainPine v3.0 499
• AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 1.87e-37
N-terminus
sp_v3.0_unigene34589 SustainPine v3.0 783
• AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 1.87354e-42
N-terminus
sp_v3.0_unigene34612 SustainPine v3.0 1122
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 5.60519e-45
• FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.953e-29
Complete
sp_v3.0_unigene34724 SustainPine v3.0 809
• AutoFact: AG-motif binding protein-2 n=1 Tax=Nicotiana tabacum RepID=Q76DY2_TOBAC 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA zinc finger family protein 5.167e-16
Putative Complete
sp_v3.0_unigene34741 SustainPine v3.0 795
• AutoFact: Homeobox transcription factor KN1 n=3 Tax=Pinaceae RepID=Q5SC65_PINTA 0.0
• FL-Next: tr=Homeobox transcription factor KN1; Pinus taeda (Loblolly pine). 0.0
• Sma3: Homeobox protein knotted-1-like 1 2.516e-07
C-terminus
sp_v3.0_unigene34779 SustainPine v3.0 464
• AutoFact: Heat stress transcription factor B-4c n=3 Tax=Oryza sativa RepID=HFB4C_ORYSJ 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock transcription factor 6.056e-20
Internal
sp_v3.0_unigene34786 SustainPine v3.0 471
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RG57_RICCO 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene34787 SustainPine v3.0 680
• AutoFact: MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: MADS-box protein 3.941e-17
Complete
sp_v3.0_unigene34820 SustainPine v3.0 571
• AutoFact: Floricaula/leafy-like protein FL1 n=2 Tax=Pinaceae RepID=NEED_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Floricaula 1.001e-33
C-terminus
sp_v3.0_unigene34975 SustainPine v3.0 758
• AutoFact: RNA polymerase sigma factor n=2 Tax=Cyanothece RepID=B7K1V2_CYAP8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sigma factor 2 2.424e-08
Putative C-terminus
sp_v3.0_unigene35107 SustainPine v3.0 912
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 2.458e-15
N-terminus
sp_v3.0_unigene35157 SustainPine v3.0 527
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene35173 SustainPine v3.0 928
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.907e-18
Putative Complete
sp_v3.0_unigene35210 SustainPine v3.0 360
• AutoFact: Putative ethylene responsive element binding protein n=1 Tax=Gossypium hirsutum RepID=Q3KZ43_GOSHI 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.204e-32
Internal
sp_v3.0_unigene35400 SustainPine v3.0 2006
• AutoFact: Floricaula/leafy-like protein FL1 n=2 Tax=Pinaceae RepID=NEED_PINRA 0.0
• FL-Next: sp=Floricaula/leafy-like protein FL1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: LFY-like protein OrcLFY 2.064e-29
Complete
sp_v3.0_unigene35620 SustainPine v3.0 921
• AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain