Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene43253 SustainPine v3.0 119
AutoFact: FAP multi-domain protein 2.0e-05
unknown
sp_v3.0_unigene43577 SustainPine v3.0 242
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 2.512e-17
Internal
sp_v3.0_unigene43712 SustainPine v3.0 337
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative N-terminus
sp_v3.0_unigene43838 SustainPine v3.0 864
AutoFact: Polygalacturonase n=1 Tax=Solanum lycopersicum RepID=Q9M7D3_SOLLC 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene44139 SustainPine v3.0 2091
AutoFact: Glucose-1-phosphate adenylyltransferase n=3 Tax=Benincaseae RepID=E5GCI5_CUCME 0.0
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Complete
sp_v3.0_unigene44257 SustainPine v3.0 576
AutoFact: Drf_FH1 multi-domain protein 2.0e-21
Sma3: Glycine-rich protein 2.503e-15
coding
sp_v3.0_unigene44325 SustainPine v3.0 487
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 8.732e-22
Internal
sp_v3.0_unigene45232 SustainPine v3.0 183
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.007e-11
Internal
sp_v3.0_unigene47557 SustainPine v3.0 173
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 1.423e-37
Internal
sp_v3.0_unigene48084 SustainPine v3.0 1546
AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene48438 SustainPine v3.0 317
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510 dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana] gb|AAT85758.1| At5g08510 [Arabido 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.078e-08
Internal
sp_v3.0_unigene48631 SustainPine v3.0 145
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 2.086e-15
Internal
sp_v3.0_unigene48692 SustainPine v3.0 250
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene49083 SustainPine v3.0 1822
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene49677 SustainPine v3.0 972
AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene49732 SustainPine v3.0 679
AutoFact: pfam01535, PPR, PPR repeat 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.54143e-44
Internal
sp_v3.0_unigene50159 SustainPine v3.0 311
AutoFact: Drf_FH1 multi-domain protein 6.0e-28
Sma3: Glycine-rich protein 2.257e-15
coding
sp_v3.0_unigene51298 SustainPine v3.0 154
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 6.0e-09
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene51540 SustainPine v3.0 585
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAL16105.1|AF428273_1 AT4g20040/F18F4_140 [Arabidopsis thaliana] gb|AAM91456.1| AT4g20040/F18F4_140 [Arabidopsis thaliana] gb|AEE84265.1| Pectin lyase-like protein [Arabidopsis thaliana] 4.0e-24
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene51858 SustainPine v3.0 340
AutoFact: Unassigned protein 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain