Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene28135 SustainPine v3.0 496
AutoFact: F-box protein PP2-B7 [Arabidopsis thaliana] sp|Q9ZVQ9.1|PP2B7_ARATH RecName: Full=F-box protein PP2-B7; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B7; Short=AtPP2-B7 gb|AAC78515.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69218.1| hypothetical p 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene28165 SustainPine v3.0 2283
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q84WW1.1|FB140_ARATH RecName: Full=F-box protein At3g12350 gb|AAN71924.1| putative F-box protein family [Arabidopsis thaliana] gb|AEE75186.1| F-box protein [Arabidopsis thaliana] 4.0e-39
FL-Next: sp=F-box protein At3g12350; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene28387 SustainPine v3.0 630
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 5.0e-18
FL-Next: sp=F-box protein SNE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene28604 SustainPine v3.0 751
AutoFact: Unassigned protein
FL-Next: sp=Probable F-box protein At1g60180; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene28630 SustainPine v3.0 1399
AutoFact: Unassigned protein
FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene28869 SustainPine v3.0 365
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.152e-11
C-terminus
sp_v3.0_unigene28900 SustainPine v3.0 677
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein 1, 2, putative 2.608e-26
Internal
sp_v3.0_unigene28956 SustainPine v3.0 1322
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr9 scaffold_65, whole genome shotgun sequence 6.694e-06
Complete
sp_v3.0_unigene29120 SustainPine v3.0 2211
AutoFact: Protein AFR, putative n=1 Tax=Ricinus communis RepID=B9SEQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein AFR, putative 2.049e-07
Complete
sp_v3.0_unigene29192 SustainPine v3.0 777
AutoFact: ATP-binding cassette transporter n=3 Tax=Ectocarpus siliculosus RepID=D7FHL6_ECTSI 9.0e-35
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene29230 SustainPine v3.0 1860
AutoFact: Glycosyl transferase, family 48 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 3.23139e-42
Complete
sp_v3.0_unigene29269 SustainPine v3.0 1923
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_203, whole genome shotgun sequence 1.108e-08
Complete
sp_v3.0_unigene29349 SustainPine v3.0 619
AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene29985 SustainPine v3.0 2518
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene30540 SustainPine v3.0 1474
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30541 SustainPine v3.0 1255
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.96182e-44
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 9.491e-11
C-terminus
sp_v3.0_unigene30987 SustainPine v3.0 615
AutoFact: Multidrug resistance protein 1, 2, putative n=1 Tax=Ricinus communis RepID=B9SA21_RICCO 8.99634e-43
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene31589 SustainPine v3.0 1878
AutoFact: Riboflavin kinase/fmn adenylyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SFB1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Haloacid dehalogenase-like hydrolase domain-containing protein 1A 1.526e-08
Complete
sp_v3.0_unigene31773 SustainPine v3.0 666
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IJZ6_POPTR 2.0e-25
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene32057 SustainPine v3.0 779
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.716e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain