Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: isoprenoid biosynthetic process

Term: GO:0008299  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1118 SustainPine v3.0 2190
AutoFact: Geranyl diphosphate synthase 3 n=1 Tax=Picea abies RepID=B1A9K7_PICAB 0.0
FL-Next: tr=Geranyl diphosphate synthase 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Geranyl diphosphate synthase 3 0.0
Complete
sp_v3.0_unigene1477 SustainPine v3.0 2031
AutoFact: DUF707 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lysine ketoglutarate reductase trans-splicing related 1 7.275e-19
Complete
sp_v3.0_unigene6998 SustainPine v3.0 1894
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
C-terminus
sp_v3.0_unigene7897 SustainPine v3.0 2752
AutoFact: 3-hydroxy-3-methylglutaryl-CoA-synthase n=1 Tax=Pinus sylvestris RepID=P93773_PINSY 0.0
FL-Next: tr=3-hydroxy-3-methylglutaryl-CoA-synthase; Pinus sylvestris (Scots pine). 0.0
Sma3: 3-hydroxy-3-methylglutaryl-CoA-synthase 0.0
Complete
sp_v3.0_unigene8501 SustainPine v3.0 2336
AutoFact: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform n=23 Tax=Magnoliophyta RepID=2AAB_ARATH 0.0
FL-Next: sp=Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine protein phosphatase 2a regulatory subunit A, putative 8.35e-09
Complete
sp_v3.0_unigene9082 SustainPine v3.0 2402
AutoFact: DUF707 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lysine ketoglutarate reductase trans-splicing related 1 7.493e-19
Complete
sp_v3.0_unigene9642 SustainPine v3.0 1202
AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene9737 SustainPine v3.0 1320
AutoFact: Geranyl diphosphate synthase 2 n=1 Tax=Picea abies RepID=B1A9K6_PICAB 0.0
FL-Next: tr=Geranyl diphosphate synthase 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Geranyl diphosphate synthase 2 0.0
Putative Complete
sp_v3.0_unigene14783 SustainPine v3.0 1324
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Complete
sp_v3.0_unigene16956 SustainPine v3.0 1496
AutoFact: Geranylgeranyl diphosphate synthase 6 n=1 Tax=Picea abies RepID=B1A9L0_PICAB 0.0
FL-Next: tr=Geranylgeranyl diphosphate synthase 6; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Geranylgeranyl diphosphate synthase 6 0.0
Complete
sp_v3.0_unigene17755 SustainPine v3.0 2075
AutoFact: acetoacetyl-CoA thiolase [Picrorhiza kurrooa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acetyl-CoA acetyltransferase, mitochondrial, putative 1.744e-12
Complete
sp_v3.0_unigene17785 SustainPine v3.0 1599
AutoFact: Farnesyl diphosphate synthase 4 n=2 Tax=Picea RepID=B1A9K8_PICAB 0.0
FL-Next: tr=Farnesyl diphosphate synthase 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Farnesyl diphosphate synthase 4 0.0
Complete
sp_v3.0_unigene18396 SustainPine v3.0 637
AutoFact: Geranylgeranyl diphosphate synthase n=3 Tax=Pinaceae RepID=Q8W1R9_ABIGR 0.0
FL-Next: tr=Geranylgeranyl diphosphate synthase; Abies grandis (Grand fir). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
N-terminus
sp_v3.0_unigene21145 SustainPine v3.0 1773
AutoFact: protein phosphatase 2A regulatory A subunit [Lolium perenne] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 2a regulatory subunit A, putative 6.743e-09
Complete
sp_v3.0_unigene21889 SustainPine v3.0 527
AutoFact: PREDICTED: squalene synthase n=1 Tax=Monodelphis domestica RepID=UPI0000F2B71B 0.0
FL-Next: tr=Squalene synthase; Taxus cuspidata (Japanese yew). 0.0
Sma3: Squalene synthase 0.0
Internal
sp_v3.0_unigene22995 SustainPine v3.0 794
AutoFact: DUF707 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lysine ketoglutarate reductase trans-splicing related 1 5.979e-19
C-terminus
sp_v3.0_unigene31594 SustainPine v3.0 675
AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 n=1 Tax=Dictyostelium discoideum RepID=HMDH2_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Putative C-terminus
sp_v3.0_unigene34242 SustainPine v3.0 894
AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squalene synthase 0.0
N-terminus
sp_v3.0_unigene34974 SustainPine v3.0 1881
AutoFact: putative polyprenyl diphosphate synthase [Oryza sativa Japonica Group] gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica Group] dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE64831.1| hypothetical 0.0
FL-Next: tr=Geranyl diphosphate synthase 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34978 SustainPine v3.0 574
AutoFact: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ginkgo biloba RepID=Q0R5D7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5.587e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain