Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene94863 SustainPine v3.0 368
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-16
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene95713 SustainPine v3.0 818
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.27e-34
Putative Complete
sp_v3.0_unigene96128 SustainPine v3.0 521
Sma3: Histone H2A 1.224e-08
unknown
sp_v3.0_unigene96650 SustainPine v3.0 788
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q00YS0_OSTTA 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene97825 SustainPine v3.0 464
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 1.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene99355 SustainPine v3.0 942
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-40
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2B 4.455e-33
Putative Complete
sp_v3.0_unigene101476 SustainPine v3.0 525
Sma3: Histone H2A 2.422e-29
unknown
sp_v3.0_unigene101905 SustainPine v3.0 466
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene102446 SustainPine v3.0 315
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.574e-19
Internal
sp_v3.0_unigene102448 SustainPine v3.0 577
AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 2.0e-06
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 5.252e-07
C-terminus
sp_v3.0_unigene103037 SustainPine v3.0 783
AutoFact: histone H4 [Hyacinthus orientalis] 8.99998e-41
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.194e-11
Putative Complete
sp_v3.0_unigene106135 SustainPine v3.0 160
unknown
sp_v3.0_unigene112180 SustainPine v3.0 499
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.0e-34
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2B 8.886e-34
C-terminus
sp_v3.0_unigene117515 SustainPine v3.0 215
AutoFact: Histone H2A n=2 Tax=Selaginella moellendorffii RepID=D8RG98_SELML 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene126969 SustainPine v3.0 980
AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.463e-33
Complete
sp_v3.0_unigene127090 SustainPine v3.0 937
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.00386e-43
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2B 7.465e-36
Putative Complete
sp_v3.0_unigene127221 SustainPine v3.0 1040
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene127466 SustainPine v3.0 992
AutoFact: NADH-dependent hydroxypyruvate reductase [Pachysandra terminalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene127487 SustainPine v3.0 589
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 6.485e-33
Putative Complete
sp_v3.0_unigene127596 SustainPine v3.0 646
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 4.00001e-41
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain