Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene144806 SustainPine v3.0 720
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene144846 SustainPine v3.0 396
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 2.188e-31
Putative Complete
sp_v3.0_unigene144879 SustainPine v3.0 332
AutoFact: histone cluster 1, H4-like [Danio rerio] gb|AAI22276.1| Zgc:153409 [Danio rerio] 3.0e-34
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.127e-11
Putative Complete
sp_v3.0_unigene144931 SustainPine v3.0 486
AutoFact: Histone H3 (Fragment) n=10 Tax=Glycine RepID=Q9FVB2_GLYTA 1.0e-09
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 1.408e-07
Putative C-terminus
sp_v3.0_unigene145045 SustainPine v3.0 528
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Putative Complete
sp_v3.0_unigene145105 SustainPine v3.0 347
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-19
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene145165 SustainPine v3.0 447
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene145170 SustainPine v3.0 555
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 4.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene145353 SustainPine v3.0 435
AutoFact: Histone H2A n=3 Tax=Andropogoneae RepID=C5XAT9_SORBI 3.0e-19
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene145423 SustainPine v3.0 763
AutoFact: RecName: Full=Histone H4 type VIII pdb|2HIO|D Chain D, Histone Octamer (Chicken), Chromosomal Protein gb|AAC60002.1| histone H4-VIII [Gallus gallus] 1.0e-32
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene145675 SustainPine v3.0 524
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene145732 SustainPine v3.0 932
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene145820 SustainPine v3.0 387
AutoFact: PREDICTED: histone H2B type 1-N-like n=4 Tax=Eutheria RepID=UPI0001D5EA9B 4.0e-34
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene146424 SustainPine v3.0 809
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene146511 SustainPine v3.0 495
AutoFact: Histone domain containing protein 2.0e-08
Sma3: Histone H3 3.933e-27
putative_coding
sp_v3.0_unigene146660 SustainPine v3.0 221
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 1.0e-19
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 1.599e-26
N-terminus
sp_v3.0_unigene146666 SustainPine v3.0 531
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene146727 SustainPine v3.0 724
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene148483 SustainPine v3.0 397
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 3.238e-38
N-terminus
sp_v3.0_unigene148969 SustainPine v3.0 238
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain