Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene59887 SustainPine v2.0 199
AutoFact: putative chromatin complex subunit A101 [Oryza sativa Japonica Group] 1.0e-15
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 3.53563e-17
Internal
sp_v2.0_unigene63332 SustainPine v2.0 324
AutoFact: Probable chromatin-remodeling complex ATPase chain n=3 Tax=Poaceae RepID=ISW2_ORYSJ 7.0e-13
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromatin-remodeling protein 11 1.69097e-15
Internal
sp_v2.0_unigene63823 SustainPine v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.20408e-41
Putative C-terminus
sp_v2.0_unigene65876 SustainPine v2.0 635
AutoFact: peptide deformylase [Arabidopsis thaliana] 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptide deformylase 1b 0.0
N-terminus
sp_v2.0_unigene66513 SustainPine v2.0 366
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2p 0.0
C-terminus
sp_v2.0_unigene67509 SustainPine v2.0 470
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
sp_v2.0_unigene67561 SustainPine v2.0 524
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 and helicase domain-containing protein 0.0
Internal
sp_v2.0_unigene67664 SustainPine v2.0 212
AutoFact: Unassigned protein
Coding
sp_v2.0_unigene68042 SustainPine v2.0 310
AutoFact: Chromatin remodeling complex subunit n=3 Tax=Populus trichocarpa RepID=B9HM77_POPTR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: atpase splayed 4.18749e-16
Internal
sp_v2.0_unigene68503 SustainPine v2.0 440
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 4.0e-35
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Blast2go: e3 ubiquitin-protein ligase shprh-like 7.72445e-35
Internal
sp_v2.0_unigene69312 SustainPine v2.0 472
AutoFact: Chromatin remodeling 38 n=5 Tax=Camelineae RepID=Q9M297_ARATH 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 3.78156e-27
Internal
sp_v2.0_unigene71738 SustainPine v2.0 173
AutoFact: Unassigned protein
unknown
sp_v2.0_unigene71740 SustainPine v2.0 265
AutoFact: protein chromatin remodeling 24 [Arabidopsis thaliana] gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana] gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana] gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna excision repair protein ercc-6-like 6.99736e-23
Internal
sp_v2.0_unigene73372 SustainPine v2.0 381
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S384_PHYPA 4.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 7.31578e-12
Internal
sp_v2.0_unigene74898 SustainPine v2.0 290
AutoFact: DUF571 multi-domain protein 2.0e-10
Coding
sp_v2.0_unigene81290 SustainPine v2.0 464
AutoFact: Chromatin remodeling complex subunit n=2 Tax=Populus trichocarpa RepID=B9H9I8_POPTR 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 6.30584e-44
Internal
sp_v2.0_unigene85754 SustainPine v2.0 198
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 5.75918e-31
Internal
sp_v2.0_unigene85850 SustainPine v2.0 897
AutoFact: putative type 1 RNA helicase [Oryza sativa Japonica Group] gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of nonsense transcripts 1 homolog 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain