Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12182 SustainPine v2.0 856
AutoFact: Calcium-binding tetratricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8S8L9.1|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At2g32450 gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gb|AAO4224 0.0
FL-Next: sp=Uncharacterized TPR repeat-containing protein At2g32450; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calcium-binding ef hand family protein 0.0
N-terminus
sp_v2.0_unigene12347 SustainPine v2.0 1651
AutoFact: Glycoside hydrolase family 17 protein n=2 Tax=Eumusa RepID=Q1EP15_MUSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light chain-like protein 0.0
C-terminus
sp_v2.0_unigene12589 SustainPine v2.0 463
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: superkiller protein 3-like protein 4.50539e-35
Internal
sp_v2.0_unigene12590 SustainPine v2.0 981
AutoFact: XPA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S614_RICCO 0.0
FL-Next: tr=XPA-binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pre-mrna-splicing factor syf1-like 0.0
Internal
sp_v2.0_unigene12659 SustainPine v2.0 1197
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Internal
sp_v2.0_unigene12818 SustainPine v2.0 2348
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9T299_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene13105 SustainPine v2.0 1749
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Complete
sp_v2.0_unigene13319 SustainPine v2.0 2618
AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
FL-Next: sp=70 kDa peptidyl-prolyl isomerase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rotamase fkbp 1 0.0
Complete
sp_v2.0_unigene13599 SustainPine v2.0 1468
AutoFact: Os10g0486900 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XD86_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat protein 1-like 0.0
Complete
sp_v2.0_unigene13813 SustainPine v2.0 1090
AutoFact: RecName: Full=Mitochondrial import receptor subunit TOM20; AltName: Full=Translocase of outer membrane 20 kDa subunit emb|CAA63223.1| TOM20 [Solanum tuberosum] 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import receptor subunit tom20 0.0
Complete
sp_v2.0_unigene14090 SustainPine v2.0 1466
AutoFact: FAP multi-domain protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100809777 7.79977e-41
Complete
sp_v2.0_unigene14804 SustainPine v2.0 584
AutoFact: Emb|CAA66827.1 n=1 Tax=Arabidopsis thaliana RepID=Q38955_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: binding protein 8.43983e-28
Internal
sp_v2.0_unigene14841 SustainPine v2.0 597
AutoFact: Chaperone protein DNAj, putative n=1 Tax=Ricinus communis RepID=B9RV92_RICCO 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: molecular chaperone hsp40 -like protein 0.0
N-terminus
sp_v2.0_unigene14882 SustainPine v2.0 1160
AutoFact: putative cyclophilin (70.8 kD) (cyp-15) [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidylprolyl isomerase domain and wd repeat-containing protein 1 0.0
Complete
sp_v2.0_unigene14909 SustainPine v2.0 1630
AutoFact: ARM-repeat/tetratricopeptide repeat-like protein [Arabidopsis thaliana] dbj|BAF01564.1| hypothetical protein [Arabidopsis thaliana] gb|AED91507.1| ARM-repeat/tetratricopeptide repeat-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: arm-repeat tetratricopeptide repeat-like protein 0.0
C-terminus
sp_v2.0_unigene15344 SustainPine v2.0 2473
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
sp_v2.0_unigene15655 SustainPine v2.0 1475
AutoFact: Peptidyl-prolyl cis-trans isomerase CYP40 [Arabidopsis thaliana] sp|Q9C566.1|CYP40_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP40; Short=PPIase CYP40; AltName: Full=Cyclophilin of 40 kDa; Short=Cyclophilin-40; AltName: Full=Protein SQUINT; 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase CYP40; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase cyp40 0.0
Complete
sp_v2.0_unigene15721 SustainPine v2.0 1197
AutoFact: FAP multi-domain protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: uncharacterized protein loc100784254 1.70422e-38
Complete
sp_v2.0_unigene15733 SustainPine v2.0 3404
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAD20090.1| putative endosomal protein [Arabidopsis thaliana] gb|AAL24256.1| At2g01970/F14H20.4 [Arabidopsis thaliana] dbj|BAE98629.1| putative endosomal protein [Arabidopsis thaliana] gb|AEC05528 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
sp_v2.0_unigene16116 SustainPine v2.0 1319
AutoFact: FLU, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flourescent in blue light protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain