Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Chromo domain/shadow

Term: IPR000953  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene43731 SustainPine v2.0 413
AutoFact: concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] sp|Q9FHG4.1|LRKS7_ARATH RecName: Full=Probable L-type lectin-domain containing receptor kinase S.7; Short=LecRK-S.7; Flags: Precursor dbj|BAB10136.1| serine/threonine-specific kinase li 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable l-type lectin-domain containing receptor kinase -like 7.35289e-41
Internal
sp_v2.0_unigene43790 SustainPine v2.0 276
AutoFact: polyprotein [Glycine max] 1.0e-22
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Blast2go: retrotransposon unclassified 7.5145e-27
Internal
sp_v2.0_unigene43832 SustainPine v2.0 662
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 2.00386e-43
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.79366e-43
Putative C-terminus
sp_v2.0_unigene43992 SustainPine v2.0 389
AutoFact: putative polyprotein [Zea mays] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 0.0
Complete
sp_v2.0_unigene44119 SustainPine v2.0 482
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pol protein integrase region 4.01276e-41
Putative C-terminus
sp_v2.0_unigene44296 SustainPine v2.0 419
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 2.0e-27
FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
Blast2go: gag-pol polyprotein 2.71978e-31
Internal
sp_v2.0_unigene44813 SustainPine v2.0 462
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=3 Tax=Oryza sativa RepID=Q2QST6_ORYSJ 5.0e-34
FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.62798e-39
Internal
sp_v2.0_unigene45192 SustainPine v2.0 395
AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 4.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 2.73259e-36
Putative Complete
sp_v2.0_unigene46215 SustainPine v2.0 541
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene46695 SustainPine v2.0 486
AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 7.0e-26
FL-Next: tr=F5K24.1 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gag-pol polyprotein 3.29e-29
Internal
sp_v2.0_unigene46819 SustainPine v2.0 299
AutoFact: CHD3-type chromatin-remodeling factor PICKLE n=2 Tax=Arabidopsis RepID=PKL_ARATH 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene47024 SustainPine v2.0 461
AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ 3.0e-36
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 5.73411e-42
Internal
sp_v2.0_unigene47135 SustainPine v2.0 331
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 4.0e-29
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854181 7.72566e-34
Putative N-terminus
sp_v2.0_unigene48040 SustainPine v2.0 421
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.2039e-45
Internal
sp_v2.0_unigene48365 SustainPine v2.0 499
AutoFact: OSJNBb0115I09.18 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XL94_ORYSJ 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 3.82932e-34
Internal
sp_v2.0_unigene48383 SustainPine v2.0 539
AutoFact: Os01g0779300 protein n=2 Tax=Oryza sativa RepID=Q94DZ6_ORYSJ 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 3.6429e-30
Putative C-terminus
sp_v2.0_unigene48440 SustainPine v2.0 212
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 2.0e-25
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 8.07506e-31
Internal
sp_v2.0_unigene49752 SustainPine v2.0 389
AutoFact: Leucine-rich repeat transmembrane protein kinase n=1 Tax=Glycine max RepID=C6FF66_SOYBN 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g06840-like 4.615e-34
Internal
sp_v2.0_unigene50203 SustainPine v2.0 380
AutoFact: ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8T797_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
sp_v2.0_unigene51087 SustainPine v2.0 199
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: reverse transcriptase 1.05371e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain