Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Chromo domain/shadow

Term: IPR000953  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene32963 SustainPine v2.0 524
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.56664e-37
Putative C-terminus
sp_v2.0_unigene33606 SustainPine v2.0 615
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 8.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 6.56886e-34
Complete
sp_v2.0_unigene33857 SustainPine v2.0 976
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
N-terminus
sp_v2.0_unigene33889 SustainPine v2.0 361
• AutoFact: rve domain containing protein 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 1.60599e-28
Internal
sp_v2.0_unigene33994 SustainPine v2.0 912
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon protein 0.0
Internal
sp_v2.0_unigene34207 SustainPine v2.0 322
• AutoFact: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHD1_RICCO 8.0e-22
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
• Blast2go: leucine-rich repeat receptor-like kinase 4.51074e-26
Internal
sp_v2.0_unigene35179 SustainPine v2.0 826
• AutoFact: RVT_1 domain containing protein 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ac051624_3 retroelement 0.0
Putative Complete
sp_v2.0_unigene35936 SustainPine v2.0 525
• AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] dbj|BAD33650.1| putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] gb|EAZ44777.1| hypothetical protein OsJ_29408 [Oryza sativa Japonica Gr 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 0.0
Internal
sp_v2.0_unigene36623 SustainPine v2.0 508
• AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 0.0
Putative Complete
sp_v2.0_unigene36813 SustainPine v2.0 563
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
• FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene37368 SustainPine v2.0 458
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 2.0e-40
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon unclassified 1.09305e-40
Internal
sp_v2.0_unigene37781 SustainPine v2.0 1542
• AutoFact: Cinnamoyl-CoA reductase n=2 Tax=Malvoideae RepID=D9ZKR8_9ROSI 0.0
• FL-Next: sp=Dihydroflavonol-4-reductase; Vitis vinifera (Grape). 0.0
• Blast2go: cinnamoyl reductase 0.0
Complete
sp_v2.0_unigene37941 SustainPine v2.0 361
• AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 5.0e-34
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: snf2 family dna-dependent atpase 1.11363e-33
Internal
sp_v2.0_unigene38083 SustainPine v2.0 491
• AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna repair and recombination protein 0.0
Internal
sp_v2.0_unigene38166 SustainPine v2.0 589
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene38462 SustainPine v2.0 541
• AutoFact: protein kinase family protein [Musa balbisiana] 6.00036e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proline-rich receptor-like protein kinase perk10-like 0.0
Internal
sp_v2.0_unigene38675 SustainPine v2.0 573
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene38687 SustainPine v2.0 414
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 0.0
Internal
sp_v2.0_unigene39128 SustainPine v2.0 445
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N3S4_POPTR 8.00001e-41
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene39176 SustainPine v2.0 524
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain