Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Chromo domain/shadow

Term: IPR000953  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene83518 SustainPine v2.0 988
AutoFact: Chromo domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retroelement pol polyprotein 1.1586e-36
C-terminus
sp_v2.0_unigene83563 SustainPine v2.0 967
AutoFact: Chromo domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene83568 SustainPine v2.0 448
AutoFact: gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pol protein integrase region 5.04168e-38
Internal
sp_v2.0_unigene83571 SustainPine v2.0 423
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 9.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 7.93108e-20
Internal
sp_v2.0_unigene83584 SustainPine v2.0 684
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 1.55313e-21
Internal
sp_v2.0_unigene83591 SustainPine v2.0 374
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 1.88373e-28
Internal
sp_v2.0_unigene83603 SustainPine v2.0 596
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pol protein integrase region 0.0
Internal
sp_v2.0_unigene84581 SustainPine v2.0 204
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon expressed 1.26845e-21
Internal
sp_v2.0_unigene85075 SustainPine v2.0 1224
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_83.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SMH3_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proline-rich receptor-like protein kinase perk8-like 0.0
C-terminus
sp_v2.0_unigene85773 SustainPine v2.0 386
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.08334e-30
Putative Complete
sp_v2.0_unigene85835 SustainPine v2.0 575
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus. 0.0
Blast2go: ac051624_3 retroelement 8.81551e-35
Internal
sp_v2.0_unigene85935 SustainPine v2.0 350
AutoFact: Chromatin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SG10_RICCO 2.0e-14
FL-Next: tr=Chromatin binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromatin binding 4.02978e-17
C-terminus
sp_v2.0_unigene85981 SustainPine v2.0 430
AutoFact: zinc finger protein [Oryza sativa Indica Group] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran gtpase binding 5.24545e-26
C-terminus
sp_v2.0_unigene91506 SustainPine v2.0 492
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 0.0
Internal
sp_v2.0_unigene92152 SustainPine v2.0 427
AutoFact: Lectin receptor-type kinase n=2 Tax=Triticeae RepID=B8XSN7_AEGTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain