Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9570 SustainPine v2.0 1349
AutoFact: GDSL-lipase 1 [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene9601 SustainPine v2.0 1029
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
FL-Next: sp=Bidirectional sugar transporter SWEET1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bidirectional sugar transporter sweet1-like 0.0
Complete
sp_v2.0_unigene9710 SustainPine v2.0 511
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4K116_ARATH 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
sp_v2.0_unigene9718 SustainPine v2.0 1270
AutoFact: DUF1771 multi-domain protein 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene9728 SustainPine v2.0 1126
AutoFact: nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8LBF7.1|SWET7_ARATH RecName: Full=Bidirectional sugar transporter SWEET7; Short=AtSWEET7 gb|AAM64793.1| contains similarity to Medicago truncatula MtN3 (GB:Y08726) [Arabidopsis thaliana] gb|ABK32158.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin 3-like protein 0.0
Putative Complete
sp_v2.0_unigene9780 SustainPine v2.0 1018
AutoFact: MtN3_slv domain containing protein 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bidirectional sugar transporter sweet4-like 0.0
Complete
sp_v2.0_unigene9791 SustainPine v2.0 951
AutoFact: DUF296 domain containing protein 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
sp_v2.0_unigene9829 SustainPine v2.0 1226
AutoFact: RING-H2 subgroup RHE protein [Populus tremula x Populus alba] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl3c 0.0
Complete
sp_v2.0_unigene9905 SustainPine v2.0 2230
AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Putative Complete
sp_v2.0_unigene9915 SustainPine v2.0 568
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene10016 SustainPine v2.0 2755
AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nhl repeat-containing protein 0.0
Complete
sp_v2.0_unigene10085 SustainPine v2.0 1546
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK25939.1|AF360229_1 unknown protein [Arabidopsis thaliana] dbj|BAB11608.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64088.1| unknown protein [Arabidopsis thaliana] gb|AED97903.1| uncharacteri 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene10087 SustainPine v2.0 2119
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene10127 SustainPine v2.0 1881
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
C-terminus
sp_v2.0_unigene10187 SustainPine v2.0 1167
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WLC6.2|PP349_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g34830, chloroplastic; Flags: Precursor gb|AEE86426.1| pentatricopeptide repeat-containing protein [Ara 9.94922e-44
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g34830, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene10277 SustainPine v2.0 1943
AutoFact: pentatricopeptide repeat protein [Oryza sativa Japonica Group] gb|EAZ14485.1| hypothetical protein OsJ_04408 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: os01g67210-like protein 0.0
Putative N-terminus
sp_v2.0_unigene10467 SustainPine v2.0 911
AutoFact: putative cytochrome P450 protein [Oryza sativa Japonica Group] gb|AAP54351.1| Cytochrome P450 family protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene10477 SustainPine v2.0 804
AutoFact: DNA-damage-inducible protein f, putative n=1 Tax=Ricinus communis RepID=B9T1P4_RICCO 7.0e-17
FL-Next: sp=MATE efflux family protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug export protein mepa 3.22144e-18
N-terminus
sp_v2.0_unigene10546 SustainPine v2.0 963
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SNN7_RICCO 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative C-terminus
sp_v2.0_unigene10742 SustainPine v2.0 571
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain