|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene68842
|
SustainPine v2.0
|
385
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU
|
1.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
4.71458e-36
|
|
Internal
|
|
sp_v2.0_unigene68968
|
SustainPine v2.0
|
417
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ
|
4.0e-22
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.93551e-25
|
|
Internal
|
|
sp_v2.0_unigene69011
|
SustainPine v2.0
|
469
|
|
• AutoFact: NXRV091_F10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV091_F10 5' similar to Arabidopsis thaliana sequence At1g37060 Athila retroelment ORF 1, putative see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: uncharacterized protein loc100855032
|
5.88545e-44
|
|
Putative C-terminus
|
|
sp_v2.0_unigene69253
|
SustainPine v2.0
|
336
|
|
• AutoFact: reverse transcriptase [Ginkgo biloba]
|
8.0e-35
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Blast2go: reverse transcriptase
|
8.40779e-45
|
|
Putative C-terminus
|
|
sp_v2.0_unigene69255
|
SustainPine v2.0
|
263
|
|
• AutoFact: RVT_1 domain containing protein
|
4.0e-05
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Blast2go: reverse transcriptase
|
2.98382e-23
|
|
Putative C-terminus
|
|
sp_v2.0_unigene69532
|
SustainPine v2.0
|
469
|
|
• AutoFact: Exostosin-like n=3 Tax=Zea mays RepID=B6SNQ6_MAIZE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exostosin family protein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene69856
|
SustainPine v2.0
|
391
|
|
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF
|
1.0e-31
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: uncharacterized protein loc100854181
|
1.83806e-38
|
|
Putative N-terminus
|
|
sp_v2.0_unigene70209
|
SustainPine v2.0
|
347
|
|
• AutoFact: glycerophosphoryl diester phosphodiesterase 2 precursor-like [Oryza sativa Japonica Group]
|
6.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: probable glycerophosphoryl diester phosphodiesterase 2-like
|
9.16253e-24
|
|
Putative N-terminus
|
|
sp_v2.0_unigene70404
|
SustainPine v2.0
|
278
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
1.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase family protein
|
4.60787e-23
|
|
Internal
|
|
sp_v2.0_unigene70497
|
SustainPine v2.0
|
327
|
|
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R919_RICCO
|
4.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp binding
|
3.1127e-41
|
|
Internal
|
|
sp_v2.0_unigene70670
|
SustainPine v2.0
|
306
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=8 Tax=Oryza sativa RepID=Q2QR60_ORYSJ
|
3.0e-21
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
8.57647e-25
|
|
Internal
|
|
sp_v2.0_unigene70851
|
SustainPine v2.0
|
163
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVL5_9POAL
|
7.0e-10
|
|
• FL-Next: tr=OSJNBa0014F04.5 protein; Oryza sativa (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.2056e-12
|
|
Internal
|
|
sp_v2.0_unigene70934
|
SustainPine v2.0
|
359
|
|
• AutoFact: Putative polyprotein (Fragment) n=1 Tax=Cicer arietinum RepID=Q949K9_CICAR
|
3.0e-19
|
|
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: polyprotein
|
5.68225e-19
|
|
Internal
|
|
sp_v2.0_unigene70943
|
SustainPine v2.0
|
298
|
|
• AutoFact: rve domain containing protein
|
3.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
3.98257e-27
|
|
Internal
|
|
sp_v2.0_unigene70959
|
SustainPine v2.0
|
279
|
|
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI
|
8.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: pol protein integrase region
|
7.74644e-22
|
|
Internal
|
|
sp_v2.0_unigene71084
|
SustainPine v2.0
|
262
|
|
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF
|
7.0e-26
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: af378049_1reverse transcriptase
|
1.08763e-30
|
|
Putative Complete
|
|
sp_v2.0_unigene71217
|
SustainPine v2.0
|
405
|
|
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF
|
1.0e-27
|
|
• FL-Next: tr=Retrotransposon gag protein; Asparagus officinalis (Garden asparagus).
|
0.0
|
|
• Blast2go: retrotransposon gag protein
|
2.8911e-27
|
|
Internal
|
|
sp_v2.0_unigene71254
|
SustainPine v2.0
|
357
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon like protein
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene71345
|
SustainPine v2.0
|
470
|
|
• AutoFact: NXRV093_D07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV093_D07 5' similar to Arabidopsis thaliana sequence At2g06320 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: uncharacterized protein loc100854167
|
1.55713e-36
|
|
Internal
|
|
sp_v2.0_unigene71429
|
SustainPine v2.0
|
271
|
|
• AutoFact: RVT_1 domain containing protein
|
3.0e-10
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Blast2go: reverse transcriptase
|
8.96781e-34
|
|
Putative N-terminus
|
