Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene76869 SustainPine v2.0 548
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase catalytic subunit 0.0
Internal
sp_v2.0_unigene77004 SustainPine v2.0 1017
AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase at4g11680-like isoform 2 0.0
N-terminus
sp_v2.0_unigene77013 SustainPine v2.0 1180
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene77024 SustainPine v2.0 460
AutoFact: Cellulose synthase n=2 Tax=rosids RepID=B9HA33_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene77028 SustainPine v2.0 566
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene77050 SustainPine v2.0 438
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 3.9937e-43
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
N-terminus
sp_v2.0_unigene77082 SustainPine v2.0 470
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
N-terminus
sp_v2.0_unigene77437 SustainPine v2.0 521
AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
C-terminus
sp_v2.0_unigene77617 SustainPine v2.0 394
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene77685 SustainPine v2.0 466
AutoFact: cellulose synthase BoCesA4 [Bambusa oldhamii] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
sp_v2.0_unigene78725 SustainPine v2.0 525
AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.05738e-18
C-terminus
sp_v2.0_unigene78865 SustainPine v2.0 446
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 7.41186e-29
C-terminus
sp_v2.0_unigene79307 SustainPine v2.0 297
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene79467 SustainPine v2.0 659
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AAK44172.1|AF370357_1 unknown protein [Arabidopsis thaliana] gb|AAL15193.1| unknown protein [Arabidopsis thaliana] gb|AAM61248.1| unknown [Arabidopsis thaliana] gb|AEE35285.1| C3HC4-type RING finger 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
N-terminus
sp_v2.0_unigene79475 SustainPine v2.0 659
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase catalytic subunit 0.0
Internal
sp_v2.0_unigene80018 SustainPine v2.0 764
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 2.3078e-41
Putative Complete
sp_v2.0_unigene81437 SustainPine v2.0 597
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 6.40506e-41
Putative N-terminus
sp_v2.0_unigene82742 SustainPine v2.0 1160
AutoFact: Putative DOF zinc finger protein n=1 Tax=Jatropha curcas RepID=D3GA37_9ROSI 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 2.90464e-40
Putative N-terminus
sp_v2.0_unigene82790 SustainPine v2.0 843
AutoFact: PLAC8 domain containing protein 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene82791 SustainPine v2.0 667
AutoFact: PLAC8 domain containing protein 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain