Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene42552 SustainPine v2.0 398
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.79087e-20
C-terminus
sp_v2.0_unigene42722 SustainPine v2.0 330
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.36883e-33
Internal
sp_v2.0_unigene42822 SustainPine v2.0 478
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene42833 SustainPine v2.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Putative N-terminus
sp_v2.0_unigene43055 SustainPine v2.0 698
AutoFact: Receptor kinase Lecrk n=1 Tax=Gossypium hirsutum RepID=Q7Y0Y5_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene43086 SustainPine v2.0 353
AutoFact: pfam01422, zf-NF-X1, NF-X1 type zinc finger 1.0e-06
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1-like 3.40184e-37
Internal
sp_v2.0_unigene43160 SustainPine v2.0 324
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 4.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 1.2072e-32
Internal
sp_v2.0_unigene43278 SustainPine v2.0 525
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 1.0e-32
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: zinc-finger protein 3.21905e-40
N-terminus
sp_v2.0_unigene43304 SustainPine v2.0 536
AutoFact: contains region of similarity to beta transducin family [Arabidopsis thaliana] emb|CAB80889.1| AT4g00800 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
sp_v2.0_unigene43346 SustainPine v2.0 678
AutoFact: E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana] sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL41; AltName: Full=RING-H2 finger protein ATL41 gb|AAD23719.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAL6946 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 0.0
C-terminus
sp_v2.0_unigene43375 SustainPine v2.0 524
AutoFact: RING-H2 finger protein ATL43 [Arabidopsis thaliana] gb|AAW81728.1| At5g05810 [Arabidopsis thaliana] gb|AAX49381.1| At5g05810 [Arabidopsis thaliana] gb|AED90928.1| RING-H2 finger protein ATL43 [Arabidopsis thaliana] 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger protein 0.0
Internal
sp_v2.0_unigene43387 SustainPine v2.0 403
AutoFact: Cellulose synthase catalytic subunit n=3 Tax=Pinaceae RepID=Q5DI95_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase 0.0
N-terminus
sp_v2.0_unigene43646 SustainPine v2.0 432
AutoFact: Similarity to RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9LS98_ARATH 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein atl78 2.01425e-16
C-terminus
sp_v2.0_unigene43735 SustainPine v2.0 468
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene43787 SustainPine v2.0 288
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase atl23-like 2.05676e-31
Internal
sp_v2.0_unigene43921 SustainPine v2.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene43978 SustainPine v2.0 351
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene44079 SustainPine v2.0 473
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_191.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRM5_VITVI 3.00004e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at4g01020-like protein 0.0
Internal
sp_v2.0_unigene44407 SustainPine v2.0 416
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: ring u-box domain-containing protein 5.8547e-28
Internal
sp_v2.0_unigene44472 SustainPine v2.0 266
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 3.0e-32
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: protein translocase subunit chloroplastic-like 8.42394e-39
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain