Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene13286 SustainPine v2.0 1024
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: laccase 1a 0.0
N-terminus
sp_v2.0_unigene13290 SustainPine v2.0 1018
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene13315 SustainPine v2.0 486
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.56398e-40
Internal
sp_v2.0_unigene13389 SustainPine v2.0 351
AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: diphenol oxidase laccase 0.0
Internal
sp_v2.0_unigene13505 SustainPine v2.0 1540
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Putative Complete
sp_v2.0_unigene13519 SustainPine v2.0 206
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 1.0e-26
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Blast2go: 5 -3 exoribonuclease 2.77112e-32
Internal
sp_v2.0_unigene13755 SustainPine v2.0 1013
AutoFact: [Q] COG2124 Cytochrome P450 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
C-terminus
sp_v2.0_unigene14070 SustainPine v2.0 643
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable xyloglucan endotransglucosylase hydrolase protein 23 0.0
Putative N-terminus
sp_v2.0_unigene14108 SustainPine v2.0 904
AutoFact: Cytochrome P450 78A4 n=1 Tax=Pinus radiata RepID=C78A4_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene14138 SustainPine v2.0 1854
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene14177 SustainPine v2.0 234
AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain protein 6.64665e-32
Internal
sp_v2.0_unigene14186 SustainPine v2.0 486
AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor -like 0.0
Internal
sp_v2.0_unigene14211 SustainPine v2.0 637
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: laccase 1a 0.0
C-terminus
sp_v2.0_unigene14256 SustainPine v2.0 552
AutoFact: RecName: Full=Cytochrome P450 71A1; AltName: Full=ARP-2; AltName: Full=CYPLXXIA1 gb|AAA32913.1| cytochrome P-450LXXIA1 (cyp71A1) [Persea americana] 9.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
sp_v2.0_unigene14416 SustainPine v2.0 2281
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene14567 SustainPine v2.0 1172
AutoFact: HAT family dimerization domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KHA1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerization domain-containing protein 0.0
Complete
sp_v2.0_unigene14745 SustainPine v2.0 623
AutoFact: protein kinase, Atypical group [Dictyostelium discoideum AX4] sp|Q54T85.2|TRA1_DICDI RecName: Full=Probable transcription-associated protein 1 gb|EAL66533.2| protein kinase, Atypical group [Dictyostelium discoideum AX4] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transformation transcription domain-associated protein 0.0
Internal
sp_v2.0_unigene14757 SustainPine v2.0 1025
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor 0.0
Internal
sp_v2.0_unigene14917 SustainPine v2.0 777
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerisation domain containing protein 1.69322e-26
Putative C-terminus
sp_v2.0_unigene14990 SustainPine v2.0 282
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Silene latifolia RepID=Q8W3R2_SILLA 9.0e-13
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.46805e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain