Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene11726 SustainPine v2.0 786
• AutoFact: subtilisin-like serine protease AIR3-like protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: xylem serine proteinase 1 0.0
C-terminus
sp_v2.0_unigene11763 SustainPine v2.0 729
• AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
sp_v2.0_unigene11798 SustainPine v2.0 811
• AutoFact: DNA repair protein XRCC3-like protein [Arabidopsis thaliana] ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana] sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray repair cross-complementi 7.0e-36
• FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna repair protein xrcc3-like protein 2.10195e-44
Internal
sp_v2.0_unigene11854 SustainPine v2.0 672
• AutoFact: Methylesterase n=1 Tax=Solanum lycopersicum RepID=Q6ED34_SOLLC 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyneuridine-aldehyde esterase 0.0
N-terminus
sp_v2.0_unigene11939 SustainPine v2.0 1309
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methylcrotonoyl- carboxylase subunit alpha 0.0
Putative C-terminus
sp_v2.0_unigene11960 SustainPine v2.0 1929
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9REC4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine kinase 0.0
Putative C-terminus
sp_v2.0_unigene11993 SustainPine v2.0 1124
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 5-like 0.0
Internal
sp_v2.0_unigene12198 SustainPine v2.0 509
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lectin receptor kinase 2.79972e-26
N-terminus
sp_v2.0_unigene12199 SustainPine v2.0 548
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-25
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 2.86223e-27
C-terminus
sp_v2.0_unigene12221 SustainPine v2.0 832
• AutoFact: Phospholipid-transporting ATPase, putative n=1 Tax=Ricinus communis RepID=B9S5W0_RICCO 0.0
• FL-Next: sp=Putative phospholipid-transporting ATPase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: phospholipid-transporting atpase 4-like 0.0
Internal
sp_v2.0_unigene12254 SustainPine v2.0 659
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene12269 SustainPine v2.0 457
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene12595 SustainPine v2.0 629
• AutoFact: calcium-binding EF-hand domain-containing protein [Arabidopsis thaliana] gb|AAM20402.1| unknown protein [Arabidopsis thaliana] gb|AEE32908.1| calcium-binding EF-hand domain-containing protein [Arabidopsis thaliana] 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: sodium calcium exchanger family protein 1.24269e-37
N-terminus
sp_v2.0_unigene12616 SustainPine v2.0 643
• AutoFact: serine/threonine-protein kinase Nek5 [Arabidopsis thaliana] sp|Q0WPH8.1|NEK5_ARATH RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; Short=AtNEK6; Short=AtNek5 dbj|BAF00971.1| protein kinase like protein [Ara 4.0e-28
• FL-Next: sp=Serine/threonine-protein kinase Nek5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: serine threonine-protein kinase nek5-like 1.28603e-34
N-terminus
sp_v2.0_unigene12631 SustainPine v2.0 474
• AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 9.0e-11
• FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: glutamate receptor -like 1.05297e-13
Internal
sp_v2.0_unigene12634 SustainPine v2.0 1986
• AutoFact: PREDICTED: similar to nucleic acid binding , related n=1 Tax=Vitis vinifera RepID=UPI00019860F7 0.0
• FL-Next: sp=Uncharacterized protein At4g26485; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein at4g26485-like 0.0
Complete
sp_v2.0_unigene13064 SustainPine v2.0 642
• AutoFact: Gland-specific fatty acyl-CoA reductase 1 n=1 Tax=Artemisia annua RepID=E9KL86_ARTAN 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene13117 SustainPine v2.0 1347
• AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
Complete
sp_v2.0_unigene13144 SustainPine v2.0 749
• AutoFact: Lipid binding protein n=2 Tax=Andropogoneae RepID=B4F841_MAIZE 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lipid binding 0.0
C-terminus
sp_v2.0_unigene13281 SustainPine v2.0 131
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.73073e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain