Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene10170 SustainPine v2.0 2698
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Complete
sp_v2.0_unigene10189 SustainPine v2.0 3029
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Complete
sp_v2.0_unigene10195 SustainPine v2.0 1603
AutoFact: syntaxin of plants 31 [Arabidopsis thaliana] 0.0
FL-Next: sp=Syntaxin-31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: syntaxin of plants 31 0.0
Complete
sp_v2.0_unigene10335 SustainPine v2.0 1021
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rhamnogalacturonate lyase 0.0
Putative N-terminus
sp_v2.0_unigene10471 SustainPine v2.0 564
AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
N-terminus
sp_v2.0_unigene10474 SustainPine v2.0 1019
AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mip tip subfamily 0.0
Complete
sp_v2.0_unigene10596 SustainPine v2.0 1121
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9RDI3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene10622 SustainPine v2.0 491
AutoFact: Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB 5.0e-39
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 1.4013e-44
Internal
sp_v2.0_unigene10705 SustainPine v2.0 1302
AutoFact: Subtilisin-like proteinase-like n=3 Tax=Oryza sativa RepID=Q9AX30_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene10760 SustainPine v2.0 841
AutoFact: putative protein phosphatase 2C 8 [Arabidopsis thaliana] sp|Q9LMT1.2|P2C08_ARATH RecName: Full=Probable protein phosphatase 2C 8; Short=AtPP2C08 gb|ABG48379.1| At1g18030 [Arabidopsis thaliana] gb|AEE29665.1| putative protein phosphatase 2C 8 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 8 0.0
Putative C-terminus
sp_v2.0_unigene10794 SustainPine v2.0 2284
AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosylmethionine decarboxylase proenzyme 0.0
Complete
sp_v2.0_unigene10847 SustainPine v2.0 1112
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene10989 SustainPine v2.0 967
AutoFact: AMP-binding protein n=1 Tax=Brassica napus RepID=Q96337_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long-chain-fatty-acid ligase 0.0
Putative Complete
sp_v2.0_unigene11110 SustainPine v2.0 2006
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
Complete
sp_v2.0_unigene11202 SustainPine v2.0 883
AutoFact: Dimer_Tnp_hAT domain containing protein 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100255782 0.0
C-terminus
sp_v2.0_unigene11292 SustainPine v2.0 1883
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Complete
sp_v2.0_unigene11484 SustainPine v2.0 776
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI4_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Blast2go: laccase 110c 0.0
C-terminus
sp_v2.0_unigene11532 SustainPine v2.0 1717
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 71a1-like 0.0
C-terminus
sp_v2.0_unigene11652 SustainPine v2.0 1487
AutoFact: putative syntaxin of plants 31 (ISS) [Ostreococcus tauri] emb|CAL55917.1| putative syntaxin of plants 31 (ISS) [Ostreococcus tauri] 1.0e-18
FL-Next: sp=Syntaxin-32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: syntaxin 32 3.05648e-26
Putative Complete
sp_v2.0_unigene11679 SustainPine v2.0 1513
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain