Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene58907 SustainPine v2.0 191
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 6.00486e-38
Internal
sp_v2.0_unigene58942 SustainPine v2.0 262
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 4.0e-19
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 8.45393e-19
Internal
sp_v2.0_unigene58989 SustainPine v2.0 435
AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 2.0e-26
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: retroelement pol polyprotein 1.38805e-26
Putative N-terminus
sp_v2.0_unigene59093 SustainPine v2.0 607
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q10PX3_ORYSJ 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 2.2027e-41
Putative N-terminus
sp_v2.0_unigene59151 SustainPine v2.0 303
AutoFact: WS02810.BR_M24 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02810_M24 3, mRNA sequence. 3.0e-35
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 1.40013e-29
Putative C-terminus
sp_v2.0_unigene59227 SustainPine v2.0 418
AutoFact: inositol or phosphatidylinositol kinase, putative (EC:2.7.11.1); K08874 transformation/transcription domain-associated protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transformation transcription domain-associated protein 0.0
Internal
sp_v2.0_unigene59233 SustainPine v2.0 608
AutoFact: Putative alpha-mannosidase [Oryza sativa] gb|AAM08418.1|AC112513_4 Putative alpha-mannosidase [Oryza sativa] 0.0
FL-Next: tr=Lysosomal alpha-mannosidase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: lysosomal alpha-mannosidase-like 0.0
Internal
sp_v2.0_unigene59315 SustainPine v2.0 298
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.71038e-24
Internal
sp_v2.0_unigene59381 SustainPine v2.0 636
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia sub-class 0.0
Internal
sp_v2.0_unigene59408 SustainPine v2.0 880
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene59420 SustainPine v2.0 429
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q109C6_ORYSJ 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 3.55105e-24
Putative Complete
sp_v2.0_unigene59449 SustainPine v2.0 1305
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 0.0
Internal
sp_v2.0_unigene59504 SustainPine v2.0 411
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.99871e-29
Internal
sp_v2.0_unigene59509 SustainPine v2.0 790
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 0.0
Internal
sp_v2.0_unigene59521 SustainPine v2.0 834
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 71a1-like 0.0
C-terminus
sp_v2.0_unigene59563 SustainPine v2.0 598
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera] 0.0
Putative C-terminus
sp_v2.0_unigene59599 SustainPine v2.0 386
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 2.02034e-25
Internal
sp_v2.0_unigene59652 SustainPine v2.0 822
AutoFact: rve domain containing protein 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 3.36647e-28
Putative N-terminus
sp_v2.0_unigene59674 SustainPine v2.0 341
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: disease resistance protein 1.24961e-21
C-terminus
sp_v2.0_unigene59717 SustainPine v2.0 707
AutoFact: UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SV04_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain