Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene56280 SustainPine v2.0 246
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.43514e-35
Internal
sp_v2.0_unigene56313 SustainPine v2.0 160
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 6.07325e-17
Putative Complete
sp_v2.0_unigene56433 SustainPine v2.0 331
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RYE7_PHYPA 1.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: methyltransferase-like protein 13-like 4.6339e-25
Putative N-terminus
sp_v2.0_unigene56480 SustainPine v2.0 373
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.63009e-34
Internal
sp_v2.0_unigene56578 SustainPine v2.0 331
AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 2.43978e-27
N-terminus
sp_v2.0_unigene56919 SustainPine v2.0 446
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 4.42849e-39
Internal
sp_v2.0_unigene57279 SustainPine v2.0 191
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75IK3_ORYSJ 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 9.73616e-22
Internal
sp_v2.0_unigene57305 SustainPine v2.0 618
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_028182 [Vitis vinifera] 1.68786e-21
Internal
sp_v2.0_unigene57348 SustainPine v2.0 364
AutoFact: reverse transcriptase [Cycas revoluta] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene57365 SustainPine v2.0 371
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 1.41969e-34
Putative C-terminus
sp_v2.0_unigene57371 SustainPine v2.0 573
AutoFact: ripening regulated protein DDTFR18 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal
sp_v2.0_unigene57380 SustainPine v2.0 288
AutoFact: RVT_2 domain containing protein 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.85746e-23
Putative N-terminus
sp_v2.0_unigene57454 SustainPine v2.0 284
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8SJZ1_SELML 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 1.4826e-38
Internal
sp_v2.0_unigene57819 SustainPine v2.0 384
AutoFact: glycerol-3-phosphate acyltransferase 5 [Arabidopsis thaliana] sp|Q9CAY3.1|GPAT5_ARATH RecName: Full=Glycerol-3-phosphate acyltransferase 5; Short=AtGPAT5 gb|AAG51432.1|AC008153_5 unknown protein; 38446-40213 [Arabidopsis thaliana] dbj|BAC42290.1| unknown 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycerol-3-phosphate acyltransferase 5 6.43882e-34
Internal
sp_v2.0_unigene58055 SustainPine v2.0 326
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2RBA0_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 8.22887e-30
N-terminus
sp_v2.0_unigene58430 SustainPine v2.0 515
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 5.49785e-22
Internal
sp_v2.0_unigene58542 SustainPine v2.0 243
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.81545e-22
Internal
sp_v2.0_unigene58701 SustainPine v2.0 256
AutoFact: Kinase-like protein (Fragment) n=4 Tax=Corylus avellana RepID=C7A7Q0_CORAV 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinase-like protein 3.1767e-29
Internal
sp_v2.0_unigene58868 SustainPine v2.0 175
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 3.0e-06
FL-Next: tr=Helicase associated domain family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-dependent rna 4.52394e-09
Internal
sp_v2.0_unigene58885 SustainPine v2.0 254
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854171 6.15918e-28
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain