Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene52821 SustainPine v2.0 339
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at5g39020-like 0.0
Internal
sp_v2.0_unigene52825 SustainPine v2.0 263
AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Panicum virgatum RepID=A4GMN4_9POAL 4.0e-13
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 7.54011e-17
Putative C-terminus
sp_v2.0_unigene52893 SustainPine v2.0 462
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerization domain-containing protein 0.0
Internal
sp_v2.0_unigene52920 SustainPine v2.0 413
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 4.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 2.45181e-32
Internal
sp_v2.0_unigene52994 SustainPine v2.0 269
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 5.46198e-26
Internal
sp_v2.0_unigene53005 SustainPine v2.0 527
AutoFact: RVT_1 domain containing protein 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100259900 0.0
Putative Complete
sp_v2.0_unigene53017 SustainPine v2.0 423
AutoFact: Transcription factor DP [Arabidopsis thaliana] sp|Q9FNY2.1|DPB_ARATH RecName: Full=Transcription factor-like protein DPB; AltName: Full=DP-like protein B; Short=AtDPbB; AltName: Full=E2F dimerization partner protein B emb|CAC15484.1| DP-like protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal
sp_v2.0_unigene53243 SustainPine v2.0 100
AutoFact: Integral membrane protein, putative n=4 Tax=Brassicaceae RepID=Q8LPI3_ARATH 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene53515 SustainPine v2.0 350
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T428_RICCO 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
sp_v2.0_unigene53692 SustainPine v2.0 231
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] dbj|BAB10420.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED98165.1| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] 2.0e-22
FL-Next: tr=Glycosyl hydrolases family 38 protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: lysosomal alpha-mannosidase 1.19952e-30
Putative N-terminus
sp_v2.0_unigene53718 SustainPine v2.0 338
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac079131_10 copia-type 3.51753e-27
Internal
sp_v2.0_unigene53724 SustainPine v2.0 459
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 4.0e-31
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uncharacterized protein loc100807419 4.02256e-37
Internal
sp_v2.0_unigene54063 SustainPine v2.0 440
AutoFact: Ty3-gypsy retrotransposon protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE2_CUCME 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.61717e-23
Complete
sp_v2.0_unigene54144 SustainPine v2.0 474
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 2.0e-27
FL-Next: tr=Integrase, catalytic region; Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: retrotransposon unclassified 5.18466e-31
Internal
sp_v2.0_unigene54315 SustainPine v2.0 383
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 3.37969e-22
Internal
sp_v2.0_unigene54462 SustainPine v2.0 359
AutoFact: Unassigned protein
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein brushy 2.26047e-24
Internal
sp_v2.0_unigene54730 SustainPine v2.0 317
AutoFact: multi-drug resistance protein [Arabidopsis thaliana] 2.0e-35
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 5 1.23314e-43
Internal
sp_v2.0_unigene54752 SustainPine v2.0 386
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3G0_ORYSJ 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 8.75273e-29
Internal
sp_v2.0_unigene54849 SustainPine v2.0 320
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 5.99731e-16
Internal
sp_v2.0_unigene54889 SustainPine v2.0 280
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100801364 2.83556e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain