Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene83686 SustainPine v2.0 456
AutoFact: DNA helicase, putative n=4 Tax=rosids RepID=B9SCX8_RICCO 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: like helicase 4.23192e-43
N-terminus
sp_v2.0_unigene84229 SustainPine v2.0 704
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 7.0e-25
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Blast2go: histone h2a-like protein 2.05347e-39
Putative Complete
sp_v2.0_unigene84352 SustainPine v2.0 729
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 2.0e-39
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Putative Complete
sp_v2.0_unigene84618 SustainPine v2.0 468
AutoFact: Nucleolar RNA-binding Nop10p-like protein n=1 Tax=Wolffia arrhiza RepID=D2XQX9_WOLAR 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: h aca ribonucleoprotein complex subunit 3-like protein 1.36859e-25
Complete
sp_v2.0_unigene84826 SustainPine v2.0 631
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
Complete
sp_v2.0_unigene84869 SustainPine v2.0 645
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 1.0e-15
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: s-adenosyl methionine synthetase 2 1.2468e-19
C-terminus
sp_v2.0_unigene84899 SustainPine v2.0 1206
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g52930 f8j2_100 0.0
Putative Complete
sp_v2.0_unigene85453 SustainPine v2.0 431
AutoFact: 40S ribosomal protein S4-1 [Arabidopsis thaliana] sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1 gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana] gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana] gb|AAL341 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene85738 SustainPine v2.0 1501
AutoFact: chaperonin-60 beta subunit [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene85832 SustainPine v2.0 1028
AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleolar protein 10 0.0
Internal
sp_v2.0_unigene86148 SustainPine v2.0 670
AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein sm d3 0.0
Complete
sp_v2.0_unigene86260 SustainPine v2.0 502
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene86338 SustainPine v2.0 258
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 2.0e-23
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 3.02793e-23
Internal
sp_v2.0_unigene86862 SustainPine v2.0 427
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 4.05312e-22
Internal
sp_v2.0_unigene87711 SustainPine v2.0 718
AutoFact: 60S ribosomal protein L17 [Picea mariana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23 0.0
C-terminus
sp_v2.0_unigene89471 SustainPine v2.0 1101
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene89502 SustainPine v2.0 415
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 2.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.35984e-33
N-terminus
sp_v2.0_unigene91499 SustainPine v2.0 350
AutoFact: Formin-like (Fragment) n=3 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MDY9_PSEMZ 9.0e-16
FL-Next: sp=Formin-like protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: formin-like 1.83719e-20
Internal
sp_v2.0_unigene91604 SustainPine v2.0 1846
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Internal
sp_v2.0_unigene91866 SustainPine v2.0 337
AutoFact: 40S subunit ribosomal protein [Oryza sativa Japonica Group] dbj|BAB61063.1| 40S ribosomal protein S20 [Oryza sativa (japonica cultivar-group)] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 1.38779e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain