Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene15847 SustainPine v2.0 2456
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Complete
sp_v2.0_unigene16298 SustainPine v2.0 2001
AutoFact: Eukaryotic initiation factor 4A-1 n=67 Tax=Magnoliophyta RepID=IF4A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic initiation factor 4a 0.0
Complete
sp_v2.0_unigene16532 SustainPine v2.0 1156
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] gb|AED93710.1| translation initiation factor 3 subunit B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Putative C-terminus
sp_v2.0_unigene17109 SustainPine v2.0 1812
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 2.8026e-45
Complete
sp_v2.0_unigene19075 SustainPine v2.0 361
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus pinaster (Maritime pine). Plastid; Chloroplast. 0.0
Blast2go: dna-directed rna polymerase i subunit rpa1-like 1.4013e-45
Internal
sp_v2.0_unigene19522 SustainPine v2.0 362
AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 6.0e-12
FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 6.85019e-14
Internal
sp_v2.0_unigene21607 SustainPine v2.0 645
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 1.15498e-36
N-terminus
sp_v2.0_unigene23807 SustainPine v2.0 2371
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Complete
sp_v2.0_unigene25121 SustainPine v2.0 1901
AutoFact: RecName: Full=Eukaryotic initiation factor 4A-10; Short=eIF-4A-10; AltName: Full=ATP-dependent RNA helicase eIF4A-10 emb|CAA55642.1| translation initiation factor (eIF-4A) [Nicotiana tabacum] emb|CAA55641.1| translation initiation factor (eIF-4A) [Nicotia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene25716 SustainPine v2.0 742
AutoFact: DNA helicase RECQE-like n=2 Tax=Oryza sativa RepID=Q6K831_ORYSJ 2.0e-13
FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 0.0
Blast2go: atp-dependent dna helicase q-like 3 2.50183e-15
C-terminus
sp_v2.0_unigene26729 SustainPine v2.0 901
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Putative C-terminus
sp_v2.0_unigene29583 SustainPine v2.0 561
AutoFact: C2H2-type zinc finger protein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7G8_ARATH 2.0e-08
FL-Next: tr=At1g72050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor iiia 1.55081e-08
N-terminus
sp_v2.0_unigene33259 SustainPine v2.0 653
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 0.0
FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Blast2go: dna topoisomerase iii beta 0.0
Internal
sp_v2.0_unigene35286 SustainPine v2.0 967
AutoFact: elongation factor like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
C-terminus
sp_v2.0_unigene37797 SustainPine v2.0 430
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
sp_v2.0_unigene38293 SustainPine v2.0 358
AutoFact: Serine/threonine-protein kinase-like protein CCR2 n=2 Tax=Arabidopsis RepID=ACCR2_ARATH 5.0e-11
FL-Next: sp=Serine/threonine-protein kinase-like protein CCR2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinase family protein 1.56609e-14
Internal
sp_v2.0_unigene44622 SustainPine v2.0 226
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S355_RICCO 3.0e-27
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 2.74675e-32
Internal
sp_v2.0_unigene46520 SustainPine v2.0 517
AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 0.0
Internal
sp_v2.0_unigene48925 SustainPine v2.0 259
AutoFact: DNA topoisomerase, type IA, core n=1 Tax=Arabidopsis thaliana RepID=F4JRX3_ARATH 1.0e-17
FL-Next: sp=DNA topoisomerase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1-like 7.73178e-22
Internal
sp_v2.0_unigene52976 SustainPine v2.0 175
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 1.0e-16
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp-dependent rna helicase a-like protein 3.46227e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain