Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11811 SustainPine v2.0 1293
AutoFact: Copper ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3E8_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine arginine repetitive matrix protein 1 0.0
Internal
sp_v2.0_unigene11966 SustainPine v2.0 367
AutoFact: zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] dbj|BAA97014.1| unnamed protein product [Arabidopsis thaliana] gb|AED95872.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear export mediator factor nemf-like 1.05735e-21
C-terminus
sp_v2.0_unigene12028 SustainPine v2.0 558
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 0.0
N-terminus
sp_v2.0_unigene12033 SustainPine v2.0 677
AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding partial 0.0
Internal
sp_v2.0_unigene12109 SustainPine v2.0 506
AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna-splicing factor syf1 0.0
Internal
sp_v2.0_unigene12149 SustainPine v2.0 442
AutoFact: Pentatricopeptide repeat-containing protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9RPX5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v2.0_unigene12169 SustainPine v2.0 423
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S7A8_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.2039e-45
Internal
sp_v2.0_unigene12199 SustainPine v2.0 548
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-25
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 2.86223e-27
C-terminus
sp_v2.0_unigene12459 SustainPine v2.0 323
AutoFact: Lysyl-tRNA synthetase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D1I7_LACBS 2.0e-24
FL-Next: sp=Lysyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: lysyl-trna synthetase 2.35533e-31
C-terminus
sp_v2.0_unigene12489 SustainPine v2.0 1166
AutoFact: zinc finger protein 6 [Arabidopsis thaliana] sp|Q39265.1|ZFP6_ARATH RecName: Full=Zinc finger protein 6 gb|AAF98212.1|AC007152_8 zinc finger protein zep6 [Arabidopsis thaliana] gb|AAA87302.1| zinc finger protein [Arabidopsis thaliana] gb|AAK91404.1| At1g6 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 4.09356e-10
N-terminus
sp_v2.0_unigene12543 SustainPine v2.0 897
AutoFact: Nuclease PA3, putative n=1 Tax=Ricinus communis RepID=B9S606_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclease s1 0.0
C-terminus
sp_v2.0_unigene12556 SustainPine v2.0 302
AutoFact: DEAD-box ATP-dependent RNA helicase 47 [Arabidopsis thaliana] sp|Q8W4E1.2|RH47_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 47, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 1586; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 1; 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna helicase 1.37327e-43
Internal
sp_v2.0_unigene12598 SustainPine v2.0 2137
AutoFact: DNA binding protein ACBF-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear acid binding 0.0
Complete
sp_v2.0_unigene12722 SustainPine v2.0 2020
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Putative Complete
sp_v2.0_unigene12770 SustainPine v2.0 245
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFQ6_RICCO 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.11609e-32
Internal
sp_v2.0_unigene12871 SustainPine v2.0 493
AutoFact: Histidine kinase osmosensor protein n=1 Tax=Populus trichocarpa RepID=B9GYZ6_POPTR 2.0e-17
FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase osmosensor protein 1.71069e-19
C-terminus
sp_v2.0_unigene13043 SustainPine v2.0 1218
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL91183.1| unknown protein [Arabidopsis thaliana] gb|AAN15705.1| unknown protein [Arabidopsis thaliana] gb|AEE85082.1| C2H2-like zinc finger protein [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: c2h2-like zinc finger protein 4.76058e-23
Putative N-terminus
sp_v2.0_unigene13108 SustainPine v2.0 774
AutoFact: RNA binding motif protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ9_CUCME 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene13300 SustainPine v2.0 634
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 1.0e-20
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia protein 1.47703e-25
C-terminus
sp_v2.0_unigene13420 SustainPine v2.0 457
AutoFact: Polyprotein, putative [Solanum demissum] 9.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854168 1.0663e-26
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain