Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8067 SustainPine v2.0 1630
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v2.0_unigene8074 SustainPine v2.0 1152
AutoFact: HNH endonuclease [Arabidopsis thaliana] emb|CAB61975.1| hypothetical protein [Arabidopsis thaliana] gb|ABK32201.1| At3g47490 [Arabidopsis thaliana] gb|AEE78288.1| HNH endonuclease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hnh endonuclease 0.0
Complete
sp_v2.0_unigene8170 SustainPine v2.0 1226
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAF88114.1|AC021043_7 Unknown protein [Arabidopsis thaliana] gb|AAK97729.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAL31130.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAM63005.1| unknown [A 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8198 SustainPine v2.0 905
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ06_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: iq domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene8252 SustainPine v2.0 1704
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative Complete
sp_v2.0_unigene8307 SustainPine v2.0 1358
AutoFact: HNH endonuclease domain-containing protein [Arabidopsis thaliana] gb|AAF27111.1|AC011809_20 Unknown protein [Arabidopsis thaliana] dbj|BAC42704.1| unknown protein [Arabidopsis thaliana] gb|AAO64117.1| unknown protein [Arabidopsis thaliana] gb|AEE29745.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hnh endonuclease domain-containing protein 0.0
Complete
sp_v2.0_unigene8353 SustainPine v2.0 1659
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.582e-37
Complete
sp_v2.0_unigene8379 SustainPine v2.0 1412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene8514 SustainPine v2.0 2211
AutoFact: Os08g0486200 protein n=3 Tax=Oryza sativa RepID=Q6ZDR7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8636 SustainPine v2.0 1013
AutoFact: NUFIP1 domain containing protein 7.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear fragile x mental retardation-interacting protein 1 3.7978e-41
Internal
sp_v2.0_unigene8795 SustainPine v2.0 783
AutoFact: Rrm/rnp domain, putative n=1 Tax=Ricinus communis RepID=B9SF86_RICCO 2.0e-18
FL-Next: sp=Zinc finger CCCH domain-containing protein 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 41 6.73948e-20
Putative C-terminus
sp_v2.0_unigene8798 SustainPine v2.0 1441
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL36315.1| unknown protein [Arabidopsis thaliana] gb|AAM61245.1| zinc finger-like protein [Arabidopsis thaliana] gb|AAM91787.1| unknown protein [Arabidopsis thaliana] gb|AED97727.1| C2H2-like zinc f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family expressed 0.0
Complete
sp_v2.0_unigene8824 SustainPine v2.0 1530
AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Complete
sp_v2.0_unigene8878 SustainPine v2.0 798
AutoFact: glycine-rich RNA-binding protein PsGRBP [Pisum sativum] gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum] 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich rna-binding protein 2 6.82991e-30
C-terminus
sp_v2.0_unigene8899 SustainPine v2.0 615
AutoFact: zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] dbj|BAA97014.1| unnamed protein product [Arabidopsis thaliana] gb|AED95872.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear export mediator factor nemf-like 0.0
Internal
sp_v2.0_unigene9044 SustainPine v2.0 2637
AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
Complete
sp_v2.0_unigene9106 SustainPine v2.0 943
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
Internal
sp_v2.0_unigene9208 SustainPine v2.0 769
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene9317 SustainPine v2.0 993
AutoFact: RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana] gb|AAC67203.2| expressed protein [Arabidopsis thaliana] gb|AAO64196.1| putative DEAD/DEAH box RNA helicase (HUA ENHANCER2) [Arabidopsis thaliana] gb|AEC06028.1| RNA helicase, ATP-depend 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
Putative C-terminus
sp_v2.0_unigene9351 SustainPine v2.0 999
AutoFact: putative small nuclear ribonucleoprotein [Arabidopsis thaliana] ref|XP_002886267.1| hypothetical protein ARALYDRAFT_900374 [Arabidopsis lyrata subsp. lyrata] gb|AAD08943.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] gb|AAM64436.1| p 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein e 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain